RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 RRM2P31350 389 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 ELF3P78545 371 aaPredicted RBP14.31□□□□□ -0.12
COL9A1-210ENST00000493682 PCK2Q16822 640 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 PGBD2Q6P3X8 592 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 DUX4L9Q6RFH8 374 aaPredicted RBP14.31□□□□□ -0.12
COL9A1-210ENST00000493682 Q6ZSV7 163 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 C11orf53Q8IXP5 236 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 OR4C15Q8NGM1 316 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 SPSB4Q96A44 273 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 CMTM5Q96DZ9 223 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 OPA3Q9H6K4 179 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 TCF7L1Q9HCS4 588 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 CENPMQ9NSP4 180 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 DUX4Q9UBX2 424 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 FAM96BQ9Y3D0 163 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 COMMD3-BMI1R4GMX3 469 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 PRKDCP78527 4128 aaKnown RBP14.31□□□□□ -0.12
COL9A1-210ENST00000493682 A0A1B0GVI7 797 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 ANKRD30BLA7E2S9 258 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 TSPAN15O95858 294 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 SPARCP09486 303 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 TAF13Q15543 124 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 MICBQ29980 383 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 GDPGP1Q6ZNW5 385 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 WDR86Q86TI4 376 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 ZDHHC21Q8IVQ6 265 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 LY6G5BQ8NDX9 201 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 OR52L1Q8NGH7 329 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 OR8S1Q8NH09 359 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 LRRC29Q8WV35 223 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 MCUR1Q96AQ8 359 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 SLAMF6Q96DU3 332 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 CCL13Q99616 98 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 KCNJ15Q99712 375 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 SEMA6AQ9H2E6 1030 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 RNPEPL1Q9HAU8 725 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 ONECUT1Q9UBC0 465 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 CDH10Q9Y6N8 788 aa14.3□□□□□ -0.12
COL9A1-210ENST00000493682 XRCC2O43543 280 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 FABP3P05413 133 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 MUC1P15941 1255 aaPredicted RBP14.29□□□□□ -0.12
COL9A1-210ENST00000493682 GRK5P34947 590 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 DDOSTP39656 456 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 ENTPD1P49961 510 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 WDR38Q5JTN6 314 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 ZNF511Q8NB15 262 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 SLC37A3Q8NCC5 494 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 OR9Q1Q8NGQ5 310 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 LRTOMTQ8WZ04 291 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 MYLK2Q9H1R3 596 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 C16orf95Q9H693 158 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 MAGEL2Q9UJ55 1249 aa14.29□□□□□ -0.12
COL9A1-210ENST00000493682 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-210ENST00000493682 ZNF593O00488 134 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-210ENST00000493682 FBP1P09467 338 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 FMO3P31513 532 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 CSNK2BP67870 215 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 FAM3AP98173 230 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 PRB3Q04118 309 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-210ENST00000493682 DHRS7BQ6IAN0 325 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-210ENST00000493682 RPL13AP3Q6NVV1 102 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 METAP1DQ6UB28 335 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-210ENST00000493682 WDR82Q6UXN9 313 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 SLC16A9Q7RTY1 509 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 DPY19L4Q7Z388 723 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 C1QL4Q86Z23 238 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 FAM216BQ8N7L0 139 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 OR1M1Q8NGA1 313 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 OR8D4Q8NGM9 314 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 NPRL2Q8WTW4 380 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 SEH1LQ96EE3 360 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 IL1RAPQ9NPH3 570 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 ZNRD1Q9P1U0 126 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 CD300AQ9UGN4 299 aa14.28□□□□□ -0.12
COL9A1-210ENST00000493682 CAB39Q9Y376 341 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-210ENST00000493682 ZNF878C9JN71 531 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 TBX1O43435 398 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 GYPBP06028 91 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 HSD17B1P14061 328 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 PRDX6P30041 224 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 MSX2P35548 267 aaPredicted RBP14.27□□□□□ -0.13
COL9A1-210ENST00000493682 TEX30Q5JUR7 227 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 SLC36A1Q7Z2H8 476 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 OR9Q2Q8NGE9 314 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 FAM110DQ8TAY7 271 aaPredicted RBP14.27□□□□□ -0.13
COL9A1-210ENST00000493682 SGK3Q96BR1 496 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 DMRTB1Q96MA1 342 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 BTBD10Q9BSF8 475 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 PPP1R3EQ9H7J1 279 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 SIRT7Q9NRC8 400 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 IL20Q9NYY1 176 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 VPREB3Q9UKI3 123 aa14.27□□□□□ -0.13
COL9A1-210ENST00000493682 ZNF816-ZNF321PA0A0X1KG74 233 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 DHRS12A0PJE2 317 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 BTBD17A6NE02 478 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 RNASEK-C17orf49H0YIS7 233 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 ACOT8O14734 319 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 NPFFO15130 113 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 ARPC2O15144 300 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 NDUFB3O43676 98 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms