RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 KAAG1Q9UBP8 84 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 RNF114Q9Y508 228 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 N6AMT1Q9Y5N5 214 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 CENPVL3A0A0U1RRI6 287 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 NKX6-3A6NJ46 265 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 RIIAD1A6NNX1 92 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 DVL1O14640 695 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 NDUFB3O43676 98 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 GYPAP02724 150 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 ANXA2P07355 339 aaKnown RBP9.6□□□□□ -0.87
COL6A3-213ENST00000493475 HSD17B1P14061 328 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 ZNF3P17036 446 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 GSSP48637 474 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 ENTPD1P49961 510 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 PRKXP51817 358 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 MNAT1P51948 309 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 MXRA7P84157 204 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 IL5RAQ01344 420 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 ZNF92Q03936 586 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 GLYATL3Q5SZD4 288 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 C16orf89Q6UX73 402 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 BTN2A1Q7KYR7 527 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 DPY19L4Q7Z388 723 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 RNF148Q8N7C7 305 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 PAPD5Q8NDF8 572 aaKnown RBP9.6□□□□□ -0.87
COL6A3-213ENST00000493475 C19orf18Q8NEA5 215 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 CSNK2A3Q8NEV1 391 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 OR2T33Q8NG76 320 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 OR56B2PQ8NGI1 322 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 SLAMF6Q96DU3 332 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 MAP6Q96JE9 813 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 MICU1Q9BPX6 476 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 FUZQ9BT04 418 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 OR10A2Q9H208 303 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 FN3KQ9H479 309 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 RGCCQ9H4X1 137 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 PNRC2Q9NPJ4 139 aaKnown RBP9.6□□□□□ -0.87
COL6A3-213ENST00000493475 ONECUT1Q9UBC0 465 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 DNAJB11Q9UBS4 358 aa9.6□□□□□ -0.87
COL6A3-213ENST00000493475 PRPF19Q9UMS4 504 aaKnown RBP9.6□□□□□ -0.87
COL6A3-213ENST00000493475 TNFRSF11BO00300 401 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 CCNB2O95067 398 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 SFTPBP07988 381 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 PAICSP22234 425 aaKnown RBP9.59□□□□□ -0.87
COL6A3-213ENST00000493475 OTX1P32242 354 aaPredicted RBP9.59□□□□□ -0.87
COL6A3-213ENST00000493475 PYCR1P32322 319 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 ARF6P62330 175 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 RSPO1Q2MKA7 263 aaPredicted RBP9.59□□□□□ -0.87
COL6A3-213ENST00000493475 SNAI3Q3KNW1 292 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 TEX36Q5VZQ5 186 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 RUSC1-AS1Q66K80 236 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 DHRS7BQ6IAN0 325 aaPredicted RBP9.59□□□□□ -0.87
COL6A3-213ENST00000493475 NAA40Q86UY6 237 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 LDLRAD3Q86YD5 345 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.59□□□□□ -0.87
COL6A3-213ENST00000493475 PGAM4Q8N0Y7 254 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 GALNT4Q8N4A0 578 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 CYB561A3Q8NBI2 242 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 OR6K6Q8NGW6 343 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 OR2AE1Q8NHA4 323 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 HIST1H2AAQ96QV6 131 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 TBX15Q96SF7 602 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 CITED1Q99966 193 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 RTL8AQ9BWD3 113 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 TCF7L1Q9HCS4 588 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 CTSZQ9UBR2 303 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 RPUSD1Q9UJJ7 312 aaKnown RBP9.59□□□□□ -0.87
COL6A3-213ENST00000493475 COMMD3-BMI1R4GMX3 469 aa9.59□□□□□ -0.87
COL6A3-213ENST00000493475 A0A0G2JK05 382 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 ANKRD61A6NGH8 418 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 TVP23AA6NH52 213 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 ZNF593O00488 134 aaPredicted RBP9.58□□□□□ -0.88
COL6A3-213ENST00000493475 GPR137BO60478 399 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 MMP9P14780 707 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 RBMXP38159 391 aaKnown RBP9.58□□□□□ -0.88
COL6A3-213ENST00000493475 CX3CR1P49238 355 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 SLC25A1P53007 311 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 TAF9Q16594 264 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 C2orf68Q2NKX9 166 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 TEX30Q5JUR7 227 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 NCR3LG1Q68D85 454 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 PGBD2Q6P3X8 592 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 RASSF6Q6ZTQ3 369 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 RHOUQ7L0Q8 258 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 SHFQ7M4L6 423 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 FAM90A1Q86YD7 464 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 GCSAMQ8N6F7 178 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 OR5R1Q8NH85 324 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 LRRC29Q8WV35 223 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 MED30Q96HR3 178 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 REEP6Q96HR9 211 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 ELAC2Q9BQ52 826 aaKnown RBP9.58□□□□□ -0.88
COL6A3-213ENST00000493475 PAPOLGQ9BWT3 736 aaKnown RBP9.58□□□□□ -0.88
COL6A3-213ENST00000493475 TEX12Q9BXU0 123 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 FAM234AQ9H0X4 552 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 SIRPDQ9H106 197 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 DNTTIP1Q9H147 329 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 EGLN3Q9H6Z9 239 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 MRPL22Q9NWU5 206 aaKnown RBP9.58□□□□□ -0.88
COL6A3-213ENST00000493475 IL20Q9NYY1 176 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms