RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TMEM104Q8NE00 496 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR2T29Q8NH02 315 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 SYNPRQ8TBG9 265 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 CIRBP-AS1Q8TBR5 109 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 BAALCQ8WXS3 180 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 KCNS1Q96KK3 526 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 FAM19A4Q96LR4 140 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 RBBP8Q99708 897 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 TMEM243Q9BU79 118 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 SCRT1Q9BWW7 348 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 GGTLC1Q9BX51 225 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 RSPO3Q9BXY4 272 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 TOLLIPQ9H0E2 274 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 C1orf198Q9H425 327 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 REEP1Q9H902 201 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 C8orf17Q9NRJ1 99 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZMAT5Q9UDW3 170 aaKnown RBP1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF835Q9Y2P0 537 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR51B2Q9Y5P1 312 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 KPTNQ9Y664 436 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 NEURL4Q96JN8 1562 aa1.59□□□□□ -2.16
HMGB1P30-201ENST00000492455 BRWD3Q6RI45 1802 aa1.59□□□□□ -2.16
HMGB1P30-201ENST00000492455 PTPRTO14522 1441 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 IGKV1-27A0A075B6S5 117 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 IGHV3-72A0A0B4J1Y9 119 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 A0A0B4J2E0 115 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 A0A0J9YYE9 177 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 LOC100653049A0A140TA62 436 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 C5orf63A6NC05 138 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 TMEM150BA6NC51 233 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 CENPXA8MT69 81 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 HACD1B0YJ81 288 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 NDUFC2-KCTD14E9PQ53 114 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 TNFRSF11BO00300 401 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 TAAR5O14804 337 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 BET1O15155 118 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 CHST10O43529 356 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 KRT34O76011 436 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 GLSO94925 669 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 TGM6O95932 706 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 IGHV3-11P01762 117 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 TRBC1P01850 177 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 CD74P04233 296 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 ZNF806P0C7X5 589 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 THRAP10827 490 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 LOXP28300 417 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 POLR2IP36954 125 aaKnown RBP1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 TALDO1P37837 337 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 OPRK1P41145 380 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 CSKP41240 450 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 UBE2E1P51965 193 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 TAS2R39P59534 338 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 TAS2R31P59538 309 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 CYP24A1Q07973 514 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 SIGLEC14Q08ET2 396 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 PNOCQ13519 176 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 OR1Q1Q15612 314 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 RNASE13Q5GAN3 156 aaKnown RBP1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 SLC35D2Q76EJ3 337 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 BHLHA15Q7RTS1 189 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 OR2W3Q7Z3T1 314 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 RAB43Q86YS6 212 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 ZNF561Q8N587 486 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 WDR31Q8NA23 367 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 FBXO36Q8NEA4 188 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 OR51L1Q8NGJ5 315 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 OR4A15Q8NGL6 344 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 OR1J4Q8NGS1 313 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 ZNF461Q8TAF7 563 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 LINC01560Q8TB33 94 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 TCP10LQ8TDR4 215 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 C17orf50Q8WW18 174 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 ASZ1Q8WWH4 475 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 DEDD2Q8WXF8 326 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 OR8D1Q8WZ84 308 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 ZNF75CPQ92670 426 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 RCN3Q96D15 328 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 L3HYPDHQ96EM0 354 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 UBE2E2Q96LR5 201 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 SPIN2AQ99865 258 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 SPIN2BQ9BPZ2 258 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 TREX1Q9NSU2 369 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 HES2Q9Y543 173 aa1.58□□□□□ -2.16
HMGB1P30-201ENST00000492455 GPR179Q6PRD1 2367 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 IGHV7-4-1A0A0J9YVY3 117 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 A0A1W2PRF3 423 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 A0A1W2PRM7 423 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 SERPINB7O75635 380 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 MPZL1O95297 269 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 ETHE1O95571 254 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 CCNE2O96020 404 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 GCGP01275 180 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 MBP02144 154 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 ZNF688P0C7X2 276 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 STAG3L2P0CL84 134 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 IVDP26440 423 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 KDSRQ06136 332 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 CDC20Q12834 499 aa1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 HNRNPA1L2Q32P51 320 aaKnown RBP1.57□□□□□ -2.16
HMGB1P30-201ENST00000492455 KRTAP13-2Q52LG2 175 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms