RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 GSK3AP49840 483 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 ZNF404Q494X3 552 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 AADACL4Q5VUY2 407 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 C1orf87Q8N0U7 546 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 OR11L1Q8NGX0 322 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 ERGIC1Q969X5 290 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 MMP26Q9NRE1 261 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 PPIAL4AQ9Y536 164 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 ANKRD30BLA7E2S9 258 aa20.66■□□□□ 0.9
UPF3A-209ENST00000492270 TRAPPC2LH3BP13 241 aa20.66■□□□□ 0.9
UPF3A-209ENST00000492270 IRF2P14316 349 aa20.66■□□□□ 0.9
UPF3A-209ENST00000492270 RPS2P15880 293 aaKnown RBP20.66■□□□□ 0.9
UPF3A-209ENST00000492270 DDOSTP39656 456 aa20.66■□□□□ 0.9
UPF3A-209ENST00000492270 MEPCEQ7L2J0 689 aaKnown RBP20.66■□□□□ 0.9
UPF3A-209ENST00000492270 PHC2Q8IXK0 858 aa20.66■□□□□ 0.9
UPF3A-209ENST00000492270 OR8B12Q8NGG6 310 aa20.66■□□□□ 0.9
UPF3A-209ENST00000492270 LYZL4Q96KX0 146 aa20.66■□□□□ 0.9
UPF3A-209ENST00000492270 CNN2Q99439 309 aaKnown RBP20.66■□□□□ 0.9
UPF3A-209ENST00000492270 OSBPL10Q9BXB5 764 aa20.66■□□□□ 0.9
UPF3A-209ENST00000492270 RIBC2Q9H4K1 309 aa20.66■□□□□ 0.9
UPF3A-209ENST00000492270 FN3KRPQ9HA64 309 aa20.66■□□□□ 0.9
UPF3A-209ENST00000492270 A8MXK9 166 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 GRPP07492 148 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 WNT2P09544 360 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 KRTAP24-1Q3LI83 254 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 NXNL2Q5VZ03 156 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 LYPD2Q6UXB3 125 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 ZNF826PQ6ZT77 177 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 WDR86Q86TI4 376 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 KLBQ86Z14 1044 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 BOLLQ8N9W6 283 aaKnown RBP20.65■□□□□ 0.9
UPF3A-209ENST00000492270 GABARAPL3Q9BY60 117 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 C7orf69Q9H7B7 122 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 NIPAL2Q9H841 368 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 C1orf123Q9NWV4 160 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 RNF7Q9UBF6 113 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 OPN4Q9UHM6 478 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 ENOPH1Q9UHY7 261 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 METRNQ9UJH8 293 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 RHBDD3Q9Y3P4 386 aa20.65■□□□□ 0.9
UPF3A-209ENST00000492270 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.64■□□□□ 0.89
UPF3A-209ENST00000492270 J3QLI3 93 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 CFL1P23528 166 aaKnown RBP20.64■□□□□ 0.89
UPF3A-209ENST00000492270 ACKR3P25106 362 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 CD80P33681 288 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 OR8B8Q15620 311 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 ESCO2Q56NI9 601 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 KCTD18Q6PI47 426 aaPredicted RBP20.64■□□□□ 0.89
UPF3A-209ENST00000492270 SPERTQ8NA61 448 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 DEFB108BQ8NET1 73 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 OR8S1Q8NH09 359 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 TMEM158Q8WZ71 300 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 RGCCQ9H4X1 137 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 ADGRL4Q9HBW9 690 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 H2AFY2Q9P0M6 372 aaPredicted RBP20.64■□□□□ 0.89
UPF3A-209ENST00000492270 LRCH1Q9Y2L9 728 aa20.64■□□□□ 0.89
UPF3A-209ENST00000492270 POLR3KQ9Y2Y1 108 aaPredicted RBP20.64■□□□□ 0.89
UPF3A-209ENST00000492270 SLC22A31A6NKX4 558 aa20.63■□□□□ 0.89
UPF3A-209ENST00000492270 A6NLC8 198 aa20.63■□□□□ 0.89
UPF3A-209ENST00000492270 GATA3P23771 443 aa20.63■□□□□ 0.89
UPF3A-209ENST00000492270 C1QL2Q7Z5L3 287 aa20.63■□□□□ 0.89
UPF3A-209ENST00000492270 OR8B4Q96RC9 309 aa20.63■□□□□ 0.89
UPF3A-209ENST00000492270 PAPOLGQ9BWT3 736 aaKnown RBP20.63■□□□□ 0.89
UPF3A-209ENST00000492270 FAM206AQ9NX38 181 aa20.63■□□□□ 0.89
UPF3A-209ENST00000492270 MIOXQ9UGB7 285 aa20.63■□□□□ 0.89
UPF3A-209ENST00000492270 PPIAL4CA0A0B4J2A2 164 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 MAGEB4O15481 346 aaPredicted RBP20.62■□□□□ 0.89
UPF3A-209ENST00000492270 FSTL3O95633 263 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 CXCR4P61073 352 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 ROM1Q03395 351 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 SFRP4Q6FHJ7 346 aaPredicted RBP20.62■□□□□ 0.89
UPF3A-209ENST00000492270 SLC35F2Q8IXU6 374 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 PLPP7Q8NBV4 271 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 CSNK2A3Q8NEV1 391 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 NEIL1Q96FI4 390 aaPredicted RBP20.62■□□□□ 0.89
UPF3A-209ENST00000492270 RBM4BQ9BQ04 359 aaKnown RBP20.62■□□□□ 0.89
UPF3A-209ENST00000492270 SSBP3Q9BWW4 388 aaPredicted RBP20.62■□□□□ 0.89
UPF3A-209ENST00000492270 MROQ9BYG7 248 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 OCEL1Q9H607 264 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 C14orf119Q9NWQ9 140 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 IKZF2Q9UKS7 526 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 TMEM14AQ9Y6G1 99 aa20.62■□□□□ 0.89
UPF3A-209ENST00000492270 TMEM269A0A1B0GVZ9 245 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 C3orf80F5H4A9 247 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 EBAG9O00559 213 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 TCF21O43680 179 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 RGS9O75916 674 aaPredicted RBP20.61■□□□□ 0.89
UPF3A-209ENST00000492270 ZNF12P17014 697 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 EGR1P18146 543 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 MFGE8Q08431 387 aaPredicted RBP20.61■□□□□ 0.89
UPF3A-209ENST00000492270 DEGS2Q6QHC5 323 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 GID4Q8IVV7 300 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 C11orf53Q8IXP5 236 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 ZNF679Q8IYX0 411 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 GCSAMQ8N6F7 178 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 ASB17Q8WXJ9 295 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 OR5V1Q9UGF6 321 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 INSIG2Q9Y5U4 225 aa20.61■□□□□ 0.89
UPF3A-209ENST00000492270 hCG_1807616A0A1W2PRN6 198 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 EI24O14681 340 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms