RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 BPIFB3P59826 476 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 MAB21L1Q13394 359 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 GINS1Q14691 196 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 SNAI3Q3KNW1 292 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 KLHL12Q53G59 568 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 GLYATL3Q5SZD4 288 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 FAHD1Q6P587 224 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 ASRGL1Q7L266 308 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 TMEM179BQ7Z7N9 219 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 SEMA6DQ8NFY4 1073 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 OR2AE1Q8NHA4 323 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 THEM6Q8WUY1 208 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 OPN4Q9UHM6 478 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 ZNF391Q9UJN7 358 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 IGHV2-70DA0A0C4DH43 119 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 G3V2T6 193 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 TRAPPC2LH3BP13 241 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 SLC2A1P11166 492 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 IL5RAQ01344 420 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 FOXL1Q12952 345 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 PRAMEF6Q5VXH4 476 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 ZFP1Q6P2D0 407 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 KCTD18Q6PI47 426 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 PNLDC1Q8NA58 520 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 OR56B2PQ8NGI1 322 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 OR10S1Q8NGN2 331 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 RNF133Q8WVZ7 376 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 C22orf15Q8WYQ4 148 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 SLC25A28Q96A46 364 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 REEP6Q96HR9 211 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 MICU1Q9BPX6 476 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 NUDT16L1Q9BRJ7 211 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 ABHD6Q9BV23 337 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 GABARAPL1Q9H0R8 117 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 C1orf123Q9NWV4 160 aa13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 H2AFY2Q9P0M6 372 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-217ENST00000491330 KIR2DS1A0A191URI9 304 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 FAM183AA6NL82 134 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 EBAG9O00559 213 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 CLUP10909 449 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 CRISP1P54107 249 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 ACTR3P61158 418 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 SEC61A1P61619 476 aaKnown RBP13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 PAX8Q06710 450 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 BAMBIQ13145 260 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 MICBQ29980 383 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 GFOD2Q3B7J2 385 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 C11orf91Q3C1V1 193 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 LINC01590Q5TEZ4 76 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 GPR157Q5UAW9 335 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 LCN1P1Q5VSP4 162 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 PLBD1Q6P4A8 553 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 FAM57BQ71RH2 274 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 KRT77Q7Z794 578 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 RNPEPL1Q9HAU8 725 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 BRD7Q9NPI1 651 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 DNAJC27Q9NZQ0 273 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 LAMP5Q9UJQ1 280 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 TMEM14AQ9Y6G1 99 aa13.86□□□□□ -0.19
PDLIM2-217ENST00000491330 TMEM89A2RUT3 159 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 OOEPA6NGQ2 149 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 ADAM20O43506 726 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 ECDO95905 644 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 PRSS12P56730 875 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 WDR25Q64LD2 544 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 LYPD4Q6UWN0 246 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 DOK3Q7L591 496 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 SLC16A9Q7RTY1 509 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 TIGD4Q8IY51 512 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 IQCF1Q8N6M8 205 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 FAM81AQ8TBF8 368 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 ZNRF4Q8WWF5 429 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 ZDHHC16Q969W1 377 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 SPSB4Q96A44 273 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 CENPNQ96H22 339 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 RTL8AQ9BWD3 113 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 PAPOLGQ9BWT3 736 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 MROQ9BYG7 248 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 KRT84Q9NSB2 600 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 MPC1Q9Y5U8 109 aa13.85□□□□□ -0.19
PDLIM2-217ENST00000491330 C3orf80F5H4A9 247 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 FSHBP01225 129 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 PRTN3P24158 256 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 CD80P33681 288 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 COMPP49747 757 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 ZNF121P58317 390 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 UBA52P62987 128 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 DBPQ10586 325 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 MPPED2Q15777 294 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 SNAPC1Q16533 368 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 METTL11BQ5VVY1 283 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 KDM4DQ6B0I6 523 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 SFRP4Q6FHJ7 346 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 SLC36A1Q7Z2H8 476 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 OTOSQ8NHW6 89 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 MED20Q9H944 212 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 DYSFO75923 2080 aa13.84□□□□□ -0.19
PDLIM2-217ENST00000491330 PTBP3O95758 552 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 MUC1P15941 1255 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 PRKACGP22612 351 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms