RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 FAM90A1Q86YD7 464 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 IQCF1Q8N6M8 205 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 OR10G2Q8NGC3 310 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 OR8S1Q8NH09 359 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 TEX47Q8TBZ9 253 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 TMIGD2Q96BF3 282 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 INTS14Q96SY0 518 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 RASSF4Q9H2L5 321 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 PRDM13Q9H4Q3 707 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 MED20Q9H944 212 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 MARCH7Q9H992 704 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 CMC2Q9NRP2 79 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 DNAJC27Q9NZQ0 273 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 KIF17Q9P2E2 1029 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 hCG_38984A0A1B0GV85 526 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 FAM183AA6NL82 134 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 POM121CA8CG34 1229 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 TNFRSF13BO14836 293 aaPredicted RBP11.3□□□□□ -0.6
COL6A3-211ENST00000491233 NDUFA2O43678 99 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 FCN3O75636 299 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 TOX4O94842 621 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 MMP9P14780 707 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 DDOSTP39656 456 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 SLC15A1P46059 708 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 BPIFB3P59826 476 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 FAM3AP98173 230 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 POU4F2Q12837 409 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 FAM98BQ52LJ0 330 aaKnown RBP11.3□□□□□ -0.6
COL6A3-211ENST00000491233 METTL11BQ5VVY1 283 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 FAM57BQ71RH2 274 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 DPY19L4Q7Z388 723 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 ERI1Q8IV48 349 aaKnown RBP11.3□□□□□ -0.6
COL6A3-211ENST00000491233 ARHGAP24Q8N264 748 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 PNLDC1Q8NA58 520 aaKnown RBP11.3□□□□□ -0.6
COL6A3-211ENST00000491233 LRRC29Q8WV35 223 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 OTULINQ96BN8 352 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 REEP6Q96HR9 211 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 WDFY2Q96P53 400 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 AMELYQ99218 206 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 NIPSNAP1Q9BPW8 284 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 ABHD6Q9BV23 337 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 SIRPDQ9H106 197 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 TOR3AQ9H497 397 aa11.3□□□□□ -0.6
COL6A3-211ENST00000491233 CENPVL3A0A0U1RRI6 287 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 FAM181BA6NEQ2 426 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 H3BN98 237 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 DVL1O14640 695 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 LIPFP07098 398 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 MELTFP08582 738 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 GSTT1P30711 240 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 GRK5P34947 590 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 ZNF121P58317 390 aaPredicted RBP11.29□□□□□ -0.6
COL6A3-211ENST00000491233 CSNK2BP67870 215 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 MS4A2Q01362 244 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 TRIM25Q14258 630 aaKnown RBP11.29□□□□□ -0.6
COL6A3-211ENST00000491233 GFOD2Q3B7J2 385 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 TEX36Q5VZQ5 186 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 FIP1L1Q6UN15 594 aaKnown RBP11.29□□□□□ -0.6
COL6A3-211ENST00000491233 Q6YL49 198 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 PRSS45Q7RTY3 260 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 FGFRL1Q8N441 504 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 OR1M1Q8NGA1 313 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 RNF133Q8WVZ7 376 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 GATAD2BQ8WXI9 593 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 ST8SIA4Q92187 359 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 SGK3Q96BR1 496 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 CCDC124Q96CT7 223 aaKnown RBP11.29□□□□□ -0.6
COL6A3-211ENST00000491233 NSL1Q96IY1 281 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 PAPOLGQ9BWT3 736 aaKnown RBP11.29□□□□□ -0.6
COL6A3-211ENST00000491233 NOX4Q9NPH5 578 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 BRD7Q9NPI1 651 aa11.29□□□□□ -0.6
COL6A3-211ENST00000491233 MGAM2Q2M2H8 2515 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 IGHV1-69DA0A0B4J2H0 117 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 A0A1B0GW55 424 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 GLCEO94923 617 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 LHBP01229 141 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 IGHV1-69P01742 117 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 APOC1P02654 83 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 DUX4L2P0CJ85 424 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 DUX4L3P0CJ86 424 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 DUX4L4P0CJ87 422 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 DUX4L5P0CJ88 424 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 DUX4L6P0CJ89 424 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 DUX4L7P0CJ90 424 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 OPRL1P41146 370 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 RAG2P55895 527 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 ELF3P78545 371 aaPredicted RBP11.28□□□□□ -0.6
COL6A3-211ENST00000491233 KLHL12Q53G59 568 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 WDR38Q5JTN6 314 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 DUX4L9Q6RFH8 374 aaPredicted RBP11.28□□□□□ -0.6
COL6A3-211ENST00000491233 BTN2A1Q7KYR7 527 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 C11orf53Q8IXP5 236 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 OR52H1Q8NGJ2 320 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 GIPC3Q8TF64 312 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 LHX4Q969G2 390 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 PGAM5Q96HS1 289 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 FEVQ99581 238 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 CHIAQ9BZP6 476 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 SLITRK2Q9H156 845 aa11.28□□□□□ -0.6
COL6A3-211ENST00000491233 PPP1R3EQ9H7J1 279 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms