RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 FAM221AA4D161 298 aa12.79□□□□□ -0.36
ARHGEF39-205ENST00000490638 IFNA7P01567 189 aa12.79□□□□□ -0.36
ARHGEF39-205ENST00000490638 ZNF17P17021 662 aa12.79□□□□□ -0.36
ARHGEF39-205ENST00000490638 CA6P23280 308 aa12.79□□□□□ -0.36
ARHGEF39-205ENST00000490638 FGL1Q08830 312 aa12.79□□□□□ -0.36
ARHGEF39-205ENST00000490638 BEST4Q8NFU0 473 aa12.79□□□□□ -0.36
ARHGEF39-205ENST00000490638 TECTBQ96PL2 329 aa12.79□□□□□ -0.36
ARHGEF39-205ENST00000490638 ZNF385AQ96PM9 386 aaKnown RBP12.79□□□□□ -0.36
ARHGEF39-205ENST00000490638 ST3GAL6Q9Y274 331 aa12.79□□□□□ -0.36
ARHGEF39-205ENST00000490638 CYB5BO43169 146 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 FUT6P51993 359 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 FABP5Q01469 135 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 STEAP1BQ6NZ63 245 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 TFAP2EQ6VUC0 442 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 PELI1Q96FA3 418 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 GMPPAQ96IJ6 420 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 SLC26A1Q9H2B4 701 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 ISYNA1Q9NPH2 558 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 RALGAPA1Q6GYQ0 2036 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 AHRRA9YTQ3 701 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 HLA-AP01891 365 aaKnown RBP12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 AGTR1P30556 359 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 GPM6AP51674 278 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 TSPO2Q5TGU0 170 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 AGAP6Q5VW22 663 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 MAMSTRQ6ZN01 415 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 ADIPOR1Q96A54 375 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 CTHRC1Q96CG8 243 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 PLK3Q9H4B4 646 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 ZNF355PQ9NSJ1 428 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 NUBP2Q9Y5Y2 271 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 NCOR2Q9Y618 2525 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 CHD5Q8TDI0 1954 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 H3BMH7 237 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 M0R233 179 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 SULT1B1O43704 296 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 TUSC2O75896 110 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 RAB31Q13636 194 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 LPCAT3Q6P1A2 487 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 A0A0G2JMP0 313 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 TMEM235A6NFC5 223 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 HOXD4P09016 255 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 ALDH3B2P48448 385 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 PRSS12P56730 875 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 RBMS3Q6XE24 437 aaKnown RBP12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 STAC2Q6ZMT1 411 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 CCDC71Q8IV32 467 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 OR4M2Q8NGB6 313 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 DVL3Q92997 716 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 NDUFB11Q9NX14 153 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 ZNF391Q9UJN7 358 aa12.78□□□□□ -0.36
ARHGEF39-205ENST00000490638 DOCK9Q9BZ29 2069 aa12.77□□□□□ -0.36
ARHGEF39-205ENST00000490638 C9orf172C9J069 976 aa12.77□□□□□ -0.36
ARHGEF39-205ENST00000490638 PPIHO43447 177 aaKnown RBP12.77□□□□□ -0.36
ARHGEF39-205ENST00000490638 PRAF2O60831 178 aa12.77□□□□□ -0.36
ARHGEF39-205ENST00000490638 RPA2P15927 270 aa12.77□□□□□ -0.36
ARHGEF39-205ENST00000490638 PPP1CBP62140 327 aa12.77□□□□□ -0.36
ARHGEF39-205ENST00000490638 WDR38Q5JTN6 314 aa12.77□□□□□ -0.36
ARHGEF39-205ENST00000490638 SLC36A1Q7Z2H8 476 aa12.77□□□□□ -0.36
ARHGEF39-205ENST00000490638 NUFIP2Q7Z417 695 aaKnown RBP12.77□□□□□ -0.36
ARHGEF39-205ENST00000490638 LRRC20Q8TCA0 184 aa12.77□□□□□ -0.36
ARHGEF39-205ENST00000490638 ASB10Q8WXI3 467 aa12.77□□□□□ -0.36
ARHGEF39-205ENST00000490638 M0QYG6 137 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 GLAP06280 429 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 ZNF728P0DKX0 622 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 MVDP53602 400 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 GP2P55259 537 aaKnown RBP12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 PRSS53Q2L4Q9 553 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 HFEQ30201 348 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 FOXB2Q5VYV0 432 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 FAM214BQ7L5A3 538 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 TIPARPQ7Z3E1 657 aaKnown RBP12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 C12orf45Q8N5I9 185 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 RNF128Q8TEB7 428 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 SGK3Q96BR1 496 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 TRMT61AQ96FX7 289 aaKnown RBP12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 C4orf45Q96LM5 186 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 DOK1Q99704 481 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 FAM96BQ9Y3D0 163 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 TMEM82A0PJX8 343 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 IFITM5A6NNB3 132 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 HLA-DOBP13765 273 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 MICBQ29980 383 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 C9orf152Q5JTZ5 239 aa12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 SNRNP200O75643 2136 aaKnown RBP12.77□□□□□ -0.37
ARHGEF39-205ENST00000490638 GOSR2O14653 212 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 ZFPL1O95159 310 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 IGKV3-11P04433 115 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 ALOX5APP20292 161 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 PSMB1P20618 241 aaKnown RBP12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 THBS4P35443 961 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 ZFP36L1Q07352 338 aaKnown RBP12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 MESTQ5EB52 335 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 C1orf185Q5T7R7 199 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 AADACL4Q5VUY2 407 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 PRSS45Q7RTY3 260 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 OR10J5Q8NHC4 309 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 SPSB1Q96BD6 273 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 TMEM68Q96MH6 324 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 USF3Q68DE3 2245 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms