RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CFAP52Q8N1V2 620 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 RFLNBQ8N5W9 214 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 OR2D3Q8NGH3 330 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 OR4X1Q8NH49 305 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 OR51F2Q8NH61 342 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 OR14L1PQ8NHC6 308 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF563Q8TA94 476 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 THRSPQ92748 146 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 RSPRY1Q96DX4 576 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 ZMYND19Q96E35 227 aaPredicted RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SNX22Q96L94 193 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 NKX3-1Q99801 234 aaPredicted RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 C20orf144Q9BQM9 153 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 PCGF1Q9BSM1 259 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 DUSP23Q9BVJ7 150 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SGPP1Q9BX95 441 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 OR11A1Q9GZK7 315 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC2A4RGQ9NR83 387 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SERINC1Q9NRX5 453 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 FKBP11Q9NYL4 201 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 MARCH2Q9P0N8 246 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 OSGIN2Q9Y236 505 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 PIN4Q9Y237 131 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SIGLEC7Q9Y286 467 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 URGCP-MRPS24S4R325 110 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 PTPRDP23468 1912 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 HELZP42694 1942 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 YLPM1P49750 1951 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 A0A0C4DFX4 3053 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 C1QTNF9BB2RNN3 333 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 C1QTNF3-AMACRE9PGA6 284 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 F8W735 103 aaPredicted RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 CLDN34H7C241 214 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 K7ERQ8 282 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC17A2O00624 439 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 CCL25O15444 150 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 FRS3O43559 492 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 ERAL1O75616 437 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SCAF4O95104 1147 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SFT2D2O95562 160 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 CATP04040 527 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 MAS1P04201 325 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 UMODP07911 640 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 MMP3P08254 477 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SRP19P09132 144 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 LIPCP11150 499 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 ATP1B2P14415 290 aaPredicted RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 GLB1P16278 677 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 NPPBP16860 134 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 FCGR2CP31995 323 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 RPL4P36578 427 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SGSHP51688 502 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 NANOS3P60323 173 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 HSF1Q00613 529 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 FUT5Q11128 374 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 RAB32Q13637 225 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 EIF2B1Q14232 305 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 UPP1Q16831 310 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM240Q5SV17 173 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF684Q5T5D7 378 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 AADACL3Q5VUY0 350 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM64Q6YI46 380 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 OLIG3Q7RTU3 272 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF595Q8IYB9 648 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 CYB561A3Q8NBI2 242 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 POC1AQ8NBT0 407 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 ADAD2Q8NCV1 583 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 OR9A1PQ8NGU1 263 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 OR6K2Q8NGY2 324 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 STT3BQ8TCJ2 826 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 KCNE4Q8WWG9 221 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 KLK6Q92876 244 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 FGF13Q92913 245 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 KTI12Q96EK9 354 aaPredicted RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC41A2Q96JW4 573 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 HIST1H2AAQ96QV6 131 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 TP53RKQ96S44 253 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 GINS3Q9BRX5 216 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 NIPSNAP3BQ9BS92 247 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 C16orf70Q9BSU1 422 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 CDIP1Q9H305 208 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 METTL8Q9H825 291 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SRD5A3Q9H8P0 318 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 AP5S1Q9NUS5 200 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 AURKAIP1Q9NWT8 199 aaPredicted RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 LHX3Q9UBR4 397 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SERTAD3Q9UJW9 196 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC7A7Q9UM01 511 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 RPH3ALQ9UNE2 315 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 GTF2A1LQ9UNN4 478 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 NTNG1Q9Y2I2 539 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 U3KQE9 123 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 PLXNB2O15031 1838 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 XKRY2A2RUG3 117 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 A6NCN8 305 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 A6NIZ1 184 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 OR4C45A6NMZ5 311 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 MASP2O00187 686 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms