RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	BOD1L1	Q8NFC6	3051 aa		13.85	□□□□□ -0.19
BRD9-208	ENST00000489816	IGHV3-9	P01782	118 aa		13.85	□□□□□ -0.19
BRD9-208	ENST00000489816	STAR	P49675	285 aa		13.85	□□□□□ -0.19
BRD9-208	ENST00000489816	PDCD1	Q15116	288 aa		13.85	□□□□□ -0.19
BRD9-208	ENST00000489816	ZBTB44	Q8NCP5	570 aa		13.85	□□□□□ -0.19
BRD9-208	ENST00000489816	OR51T1	Q8NGJ9	327 aa		13.85	□□□□□ -0.19
BRD9-208	ENST00000489816	OR5M8	Q8NGP6	311 aa		13.85	□□□□□ -0.19
BRD9-208	ENST00000489816	OR1S1	Q8NH92	325 aa		13.85	□□□□□ -0.19
BRD9-208	ENST00000489816	PLEK2	Q9NYT0	353 aa		13.85	□□□□□ -0.19
BRD9-208	ENST00000489816	MBD2	Q9UBB5	411 aa		13.85	□□□□□ -0.19
BRD9-208	ENST00000489816	PFDN2	Q9UHV9	154 aa		13.85	□□□□□ -0.19
BRD9-208	ENST00000489816	SULT1C2	O00338	296 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	ANGPTL7	O43827	346 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	KNG1	P01042	644 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	SPINK2	P20155	84 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	DLST	P36957	453 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	NKAPL	Q5M9Q1	402 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	OXGR1	Q96P68	337 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	PRRT1	Q99946	306 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	GPN3	Q9UHW5	284 aa	Predicted RBP	13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	SHANK1	Q9Y566	2161 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	CD74	P04233	296 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	CDCP2	Q5VXM1	449 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	RAB12	Q6IQ22	244 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	PDZD9	Q8IXQ8	264 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	ST8SIA2	Q92186	375 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	WNT2B	Q93097	391 aa		13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	PNRC2	Q9NPJ4	139 aa	Known RBP	13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	ZNF701	Q9NV72	531 aa	Predicted RBP	13.84	□□□□□ -0.19
BRD9-208	ENST00000489816	EP300	Q09472	2414 aa	Predicted RBP	13.84	□□□□□ -0.19
BRD9-208	ENST00000489816		A0A0G2JMM0	328 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816		A0A1W2PPB8	328 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816		A0A1W2PRS3	328 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	MFSD2B	A6NFX1	497 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	KIR3DP1	A8MWS1	328 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816		F5H0A9	414 aa	Predicted RBP	13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	CDC14B	O60729	498 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	GABRR1	P24046	479 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	ZBTB25	P24278	435 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	MPG	P29372	298 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	SERPINF1	P36955	418 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	CSNK1A1	P48729	337 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	SUMO3	P55854	103 aa	Predicted RBP	13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	SLC25A47	Q6Q0C1	308 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	LYG2	Q86SG7	212 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	TMEM200A	Q86VY9	491 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	CDH26	Q8IXH8	852 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	C20orf196	Q8IYI0	205 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	ACKR4	Q9NPB9	350 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	GSKIP	Q9P0R6	139 aa		13.83	□□□□□ -0.19
BRD9-208	ENST00000489816	PMS2P1	A4D2B8	440 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	EFS	O43281	561 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	KLK3	P07288	261 aa	Predicted RBP	13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	CFP	P27918	469 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	RFC3	P40938	356 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	ATRAID	Q6UW56	229 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	LYZL4	Q96KX0	146 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	DUSP23	Q9BVJ7	150 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	NPIPA2	E9PIF3	369 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	NPIPA3	F8WFD2	350 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	BPNT1	O95861	308 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	UMOD	P07911	640 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	FCGR2A	P12318	317 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	BLVRB	P30043	206 aa	Predicted RBP	13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	CASR	P41180	1078 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	PCOLCE	Q15113	449 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	CLVS2	Q5SYC1	327 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	C11orf87	Q6NUJ2	197 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	ALX4	Q9H161	411 aa	Predicted RBP	13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	SLCO5A1	Q9H2Y9	848 aa		13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.83	□□□□□ -0.2
BRD9-208	ENST00000489816	KANTR	A0A1W2PQU2	76 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	FAM221A	A4D161	298 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	TMEM14DP	A8MWL7	114 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816		B8ZZF3	427 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	GLRA1	P23415	457 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	KISS1	Q15726	138 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	UBE2V2	Q15819	145 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	OR5M9	Q8NGP3	310 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	OR6X1	Q8NH79	312 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	FBXW5	Q969U6	566 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	PHB2	Q99623	299 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	KIF25	Q9UIL4	384 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816		A0A1W2PNV4	684 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	TTLL8	A6PVC2	850 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	AMY2B	P19961	511 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	MSX1	P28360	303 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	OTX2	P32243	289 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	MEF2D	Q14814	521 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	C6orf201	Q7Z4U5	140 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	SLC25A42	Q86VD7	318 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	C1orf147	Q96MC9	270 aa	Predicted RBP	13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	DKKL1	Q9UK85	242 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	HS3ST3B1	Q9Y662	390 aa		13.82	□□□□□ -0.2
BRD9-208	ENST00000489816	LOC105371267	A0A1B0GV96	52 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	TP53I11	O14683	189 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	B3GALNT1	O75752	331 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms