RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 OR51G2Q8NGK0 314 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 FAM81AQ8TBF8 368 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 RFKQ969G6 155 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 ERGIC1Q969X5 290 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 EME1Q96AY2 570 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 MNTQ99583 582 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 C14orf119Q9NWQ9 140 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 USE1Q9NZ43 259 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 WARS2Q9UGM6 360 aaKnown RBP11.28□□□□□ -0.6
CCL28-202ENST00000489442 TRAV20A0A0B4J274 112 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 ZNF205O95201 554 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 CYB5R3P00387 301 aaPredicted RBP11.27□□□□□ -0.61
CCL28-202ENST00000489442 GRPP07492 148 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 SRP14P37108 136 aaKnown RBP11.27□□□□□ -0.61
CCL28-202ENST00000489442 MDH2P40926 338 aaKnown RBP11.27□□□□□ -0.61
CCL28-202ENST00000489442 CD200P41217 278 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 GATA4P43694 442 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 GSK3AP49840 483 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 ZMYND11Q15326 602 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 ZNF829Q3KNS6 432 aaPredicted RBP11.27□□□□□ -0.61
CCL28-202ENST00000489442 TMEM155Q4W5P6 130 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 PRAMEF6Q5VXH4 476 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 FAHD2BQ6P2I3 314 aaPredicted RBP11.27□□□□□ -0.61
CCL28-202ENST00000489442 ZNF322Q6U7Q0 402 aaPredicted RBP11.27□□□□□ -0.61
CCL28-202ENST00000489442 ZBTB49Q6ZSB9 765 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 PRSS45Q7RTY3 260 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 LRRC28Q86X40 367 aaPredicted RBP11.27□□□□□ -0.61
CCL28-202ENST00000489442 PRIMA1Q86XR5 153 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 PQLC1Q8N2U9 271 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 CSNK2A3Q8NEV1 391 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 TRUB1Q8WWH5 349 aaKnown RBP11.27□□□□□ -0.61
CCL28-202ENST00000489442 DVL3Q92997 716 aaPredicted RBP11.27□□□□□ -0.61
CCL28-202ENST00000489442 FAHD2AQ96GK7 314 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 OR8B4Q96RC9 309 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 FN3KRPQ9HA64 309 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 ADGRL4Q9HBW9 690 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 CLN6Q9NWW5 311 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 HAO2Q9NYQ3 351 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 ZNF319Q9P2F9 582 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 ZNF391Q9UJN7 358 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 GTF2A1LQ9UNN4 478 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 COPS3Q9UNS2 423 aa11.27□□□□□ -0.61
CCL28-202ENST00000489442 COL6A5A8TX70 2615 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 hCG_38984A0A1B0GV85 526 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 ACOD1A6NK06 481 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 A6NLC8 198 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 PLPP2O43688 288 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 HTR1FP30939 366 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 ROM1Q03395 351 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 POU4F2Q12837 409 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 MPPED2Q15777 294 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 ZNF181Q2M3W8 571 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 PLPP7Q8NBV4 271 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 OR8B12Q8NGG6 310 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 HRASLS5Q96KN8 279 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 SIGLEC11Q96RL6 698 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 TBX5Q99593 518 aa11.26□□□□□ -0.61
CCL28-202ENST00000489442 PAPOLGQ9BWT3 736 aaKnown RBP11.26□□□□□ -0.61
CCL28-202ENST00000489442 PPIAL4EA0A075B759 164 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 hCG_1807616A0A1W2PRN6 198 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 ANXA2P2A6NMY6 339 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 PPIAL4DF5H284 164 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 FAM20BO75063 409 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 FOXH1O75593 365 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 KRT8P05787 483 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 PPIAL4FP0DN26 164 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 DCTDP32321 178 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 PMELP40967 661 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 LCN2P80188 198 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 TMED1Q13445 227 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 DCAF12L2Q5VW00 463 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 BOLLQ8N9W6 283 aaKnown RBP11.25□□□□□ -0.61
CCL28-202ENST00000489442 OR10H4Q8NGA5 316 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 HIST1H2AAQ96QV6 131 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 APOL4Q9BPW4 351 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 PBOV1Q9GZY1 135 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 PATZ1Q9HBE1 687 aaKnown RBP11.25□□□□□ -0.61
CCL28-202ENST00000489442 C1orf123Q9NWV4 160 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 RNF7Q9UBF6 113 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCL28-202ENST00000489442 PPIAL4AQ9Y536 164 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 GMPPBQ9Y5P6 360 aa11.25□□□□□ -0.61
CCL28-202ENST00000489442 A0A0G2JMP0 313 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 A0A0U1RQV5 110 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 A0A0X1KG70 313 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 SNTNA6NMZ2 147 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 MAGEB4O15481 346 aaPredicted RBP11.24□□□□□ -0.61
CCL28-202ENST00000489442 APOL3O95236 402 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 PNPP00491 289 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 OR2T7P0C7T2 308 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 RPS2P15880 293 aaKnown RBP11.24□□□□□ -0.61
CCL28-202ENST00000489442 MAP2K3P46734 347 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 EGR3Q06889 387 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 OR8B8Q15620 311 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 ESCO2Q56NI9 601 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 MEDAGQ5VYS4 303 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 THAP5Q7Z6K1 395 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 RFLNBQ8N5W9 214 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 YIPF7Q8N8F6 280 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 DEFB108BQ8NET1 73 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms