RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 Q6ZSR6 202 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 OR5P3Q8WZ94 311 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 CDS1Q92903 461 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 RBPMSQ93062 196 aaKnown RBP0.6□□□□□ -2.31
CBWD1-216ENST00000489272 BTN2A3PQ96KV6 586 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 VCX2Q9H322 139 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 ZNF442Q9H7R0 627 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 RRAGDQ9NQL2 400 aaPredicted RBP0.6□□□□□ -2.31
CBWD1-216ENST00000489272 OR2S2Q9NQN1 319 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 KANK1Q14678 1352 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 KMT2EQ8IZD2 1858 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 FLOT1O75955 427 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 AQP8O94778 261 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 TGM6O95932 706 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 GZMHP20718 246 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 BMI1P35226 326 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 SEMG2Q02383 582 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 TSC22D1Q15714 1073 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 PSMD5Q16401 504 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 MRPL2Q5T653 305 aaKnown RBP0.59□□□□□ -2.31
CBWD1-216ENST00000489272 ZNF322Q6U7Q0 402 aaPredicted RBP0.59□□□□□ -2.31
CBWD1-216ENST00000489272 C12orf54Q6X4T0 127 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 OR4D6Q8NGJ1 314 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 RNASE11Q8TAA1 199 aaKnown RBP0.59□□□□□ -2.31
CBWD1-216ENST00000489272 DCAKDQ8WVC6 231 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 PIGUQ9H490 435 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 DCAF16Q9NXF7 216 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 RAB22AQ9UL26 194 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 COMMD3-BMI1R4GMX3 469 aa0.59□□□□□ -2.31
CBWD1-216ENST00000489272 USP47Q96K76 1375 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 COL6A6A6NMZ7 2263 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 A6NDN8 102 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 AIM2O14862 343 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 S1PR2O95136 353 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 OR5AC1P0C628 307 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 HNRNPH3P31942 346 aaKnown RBP0.58□□□□□ -2.32
CBWD1-216ENST00000489272 AIF1P55008 147 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 CCL23P55773 120 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 KRTAP10-4P60372 401 aaPredicted RBP0.58□□□□□ -2.32
CBWD1-216ENST00000489272 PPM1LQ5SGD2 360 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 OR4M2Q8NGB6 313 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 NUBPLQ8TB37 319 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 MS4A8Q9BY19 250 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 CCDC59Q9P031 241 aaKnown RBP0.58□□□□□ -2.32
CBWD1-216ENST00000489272 PSMC3IPQ9P2W1 217 aaPredicted RBP0.58□□□□□ -2.32
CBWD1-216ENST00000489272 DDX19BQ9UMR2 479 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 STARD10Q9Y365 291 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 MPDZO75970 2070 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 ATG2BQ96BY7 2078 aa0.58□□□□□ -2.32
CBWD1-216ENST00000489272 C2orf16Q68DN1 1984 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 MALRD1Q5VYJ5 2156 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 SCAMP2O15127 329 aaKnown RBP0.57□□□□□ -2.32
CBWD1-216ENST00000489272 MTX2O75431 263 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 FARS2O95363 451 aaKnown RBP0.57□□□□□ -2.32
CBWD1-216ENST00000489272 FGFR1OPO95684 399 aaKnown RBP0.57□□□□□ -2.32
CBWD1-216ENST00000489272 IGHV3-53P01767 116 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 ANXA5P08758 320 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 MX1P20591 662 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 BPIFB3P59826 476 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 EIF3EP60228 445 aaKnown RBP0.57□□□□□ -2.32
CBWD1-216ENST00000489272 PPP1CAP62136 330 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 ZNF829Q3KNS6 432 aaPredicted RBP0.57□□□□□ -2.32
CBWD1-216ENST00000489272 TPTE2P1Q5T6R2 138 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 MFSD14CQ5VZR4 134 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 CBLN2Q8IUK8 224 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 LRRC8AQ8IWT6 810 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 CDH26Q8IXH8 852 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 CPNE9Q8IYJ1 553 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 DNAAF3Q8N9W5 541 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 ZFP62Q8NB50 900 aaPredicted RBP0.57□□□□□ -2.32
CBWD1-216ENST00000489272 BHLHE23Q8NDY6 225 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 BPIFCQ8NFQ6 507 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 SLC25A44Q96H78 314 aaPredicted RBP0.57□□□□□ -2.32
CBWD1-216ENST00000489272 RGS18Q9NS28 235 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 ISY1Q9ULR0 285 aaKnown RBP0.57□□□□□ -2.32
CBWD1-216ENST00000489272 CAB39Q9Y376 341 aaPredicted RBP0.57□□□□□ -2.32
CBWD1-216ENST00000489272 STRCP1A6NGW2 1772 aa0.57□□□□□ -2.32
CBWD1-216ENST00000489272 BRCA1P38398 1863 aaKnown RBP0.56□□□□□ -2.32
CBWD1-216ENST00000489272 NUP205Q92621 2012 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 IGKV1OR2-108A0A075B7D4 117 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 IGKV1-6A0A0C4DH72 117 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 SLC31A1O15431 190 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 ENTPD6O75354 484 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 CLDN11O75508 207 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 IL1BP01584 269 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 IGKV1-39P01597 117 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 IGKV1D-39P04432 117 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 MYL9P24844 172 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 APLNRP35414 380 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 ACLYP53396 1101 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 CDC37Q16543 378 aaPredicted RBP0.56□□□□□ -2.32
CBWD1-216ENST00000489272 KIFAP3Q92845 792 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 S100PBPQ96BU1 408 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 ECHDC3Q96DC8 303 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 PEBP4Q96S96 227 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 ILKAPQ9H0C8 392 aaPredicted RBP0.56□□□□□ -2.32
CBWD1-216ENST00000489272 OR51M1Q9H341 326 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 SLC39A1Q9NY26 324 aa0.56□□□□□ -2.32
CBWD1-216ENST00000489272 STX18Q9P2W9 335 aaKnown RBP0.56□□□□□ -2.32
CBWD1-216ENST00000489272 CES1P1Q9UKY3 287 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms