RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 BCDIN3DQ7Z5W3 292 aaKnown RBP12.03□□□□□ -0.48
BRCA1-218ENST00000489037 PRIMA1Q86XR5 153 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 SLC35F2Q8IXU6 374 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 ZNF679Q8IYX0 411 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 PLPP7Q8NBV4 271 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 TRUB1Q8WWH5 349 aaKnown RBP12.03□□□□□ -0.48
BRCA1-218ENST00000489037 FAHD2AQ96GK7 314 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 PATZ1Q9HBE1 687 aaKnown RBP12.03□□□□□ -0.48
BRCA1-218ENST00000489037 UFSP2Q9NUQ7 469 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 HAO2Q9NYQ3 351 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 USE1Q9NZ43 259 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 KLHDC2Q9Y2U9 406 aa12.03□□□□□ -0.48
BRCA1-218ENST00000489037 PPIAL4EA0A075B759 164 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 A0A0G2JMP0 313 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 A0A0X1KG70 313 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 hCG_38984A0A1B0GV85 526 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 TMEM269A0A1B0GVZ9 245 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 A6NLC8 198 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 ANXA2P2A6NMY6 339 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 PPIAL4DF5H284 164 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 PSMD9O00233 223 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 EI24O14681 340 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 BAG2O95816 211 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 ALPLP05186 524 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 PPIAL4FP0DN26 164 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 CPT2P23786 658 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 HTR1FP30939 366 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 DCTDP32321 178 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 TMED1Q13445 227 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 ZMYND11Q15326 602 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 PRAMEF6Q5VXH4 476 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 COMMD2Q86X83 199 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 OR4M2Q8NGB6 313 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 OR51G2Q8NGK0 314 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 FAM81AQ8TBF8 368 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 Q8TCH9 128 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 ITFG2Q969R8 447 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 OR8B4Q96RC9 309 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 SIGLEC11Q96RL6 698 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 ABCB9Q9NP78 766 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 CLN6Q9NWW5 311 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.02□□□□□ -0.49
BRCA1-218ENST00000489037 RNF7Q9UBF6 113 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 PPIAL4AQ9Y536 164 aa12.02□□□□□ -0.49
BRCA1-218ENST00000489037 SNTNA6NMZ2 147 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 FAM20BO75063 409 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 PNPP00491 289 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 GRPP07492 148 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 ANOS1P23352 680 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 GATA3P23771 443 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 CXCR4P61073 352 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 IL5RAQ01344 420 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 ROM1Q03395 351 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 EGR3Q06889 387 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 SCGB2A2Q13296 93 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 KCNJ8Q15842 424 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 ZIK1Q3SY52 487 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-218ENST00000489037 ESCO2Q56NI9 601 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 DCAF12L2Q5VW00 463 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 ZNF322Q6U7Q0 402 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-218ENST00000489037 ZBTB49Q6ZSB9 765 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 PQLC1Q8N2U9 271 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 CBR4Q8N4T8 237 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 OR8B12Q8NGG6 310 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 EME1Q96AY2 570 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 HIST1H2AAQ96QV6 131 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 MICU1Q9BPX6 476 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 PAPOLGQ9BWT3 736 aaKnown RBP12.01□□□□□ -0.49
BRCA1-218ENST00000489037 TTTY10Q9BZA0 68 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 ADGRL4Q9HBW9 690 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 TRIM36Q9NQ86 728 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 ZNF319Q9P2F9 582 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 MIOXQ9UGB7 285 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 GTF2A1LQ9UNN4 478 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 COPS3Q9UNS2 423 aa12.01□□□□□ -0.49
BRCA1-218ENST00000489037 hCG_1807616A0A1W2PRN6 198 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 J3QLI3 93 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 ZNF205O95201 554 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 FSTL3O95633 263 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 KRT8P05787 483 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 OR2T7P0C7T2 308 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 RPS2P15880 293 aaKnown RBP12□□□□□ -0.49
BRCA1-218ENST00000489037 MAP2K3P46734 347 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 LCN2P80188 198 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 OR8B8Q15620 311 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 MPPED2Q15777 294 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 MEDAGQ5VYS4 303 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 NLRC3Q7RTR2 1065 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 THAP5Q7Z6K1 395 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 BOLLQ8N9W6 283 aaKnown RBP12□□□□□ -0.49
BRCA1-218ENST00000489037 OR2T27Q8NH04 317 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 DVL3Q92997 716 aaPredicted RBP12□□□□□ -0.49
BRCA1-218ENST00000489037 HRASLS5Q96KN8 279 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 PBOV1Q9GZY1 135 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 MOB1AQ9H8S9 216 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 TMEM165Q9HC07 324 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 C1orf123Q9NWV4 160 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12□□□□□ -0.49
BRCA1-218ENST00000489037 MPC1Q9Y5U8 109 aa12□□□□□ -0.49
BRCA1-218ENST00000489037 A0A0U1RQV5 110 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms