RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 GPR119Q8TDV5 335 aa17.33■□□□□ 0.36
HMG20B-213ENST00000488973 ADAT3Q96EY9 351 aaPredicted RBP17.33■□□□□ 0.36
HMG20B-213ENST00000488973 NRIP2Q9BQI9 281 aa17.33■□□□□ 0.36
HMG20B-213ENST00000488973 OR11A1Q9GZK7 315 aa17.33■□□□□ 0.36
HMG20B-213ENST00000488973 TMEM231Q9H6L2 316 aa17.33■□□□□ 0.36
HMG20B-213ENST00000488973 RCC2Q9P258 522 aaKnown RBP17.33■□□□□ 0.36
HMG20B-213ENST00000488973 RP1P56715 2156 aa17.33■□□□□ 0.36
HMG20B-213ENST00000488973 SEMA4FO95754 770 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 CTHP32929 405 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 CAPZBP47756 277 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 PDZK1IP1Q13113 114 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 FZD2Q14332 565 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 HLA-DQA1Q5Y7H0 255 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 ZNF529Q6P280 563 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 ZNF585AQ6P3V2 769 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 OR5D14Q8NGL3 314 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 ADAMTS17Q8TE56 1095 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 TSLPQ969D9 159 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 SMIM8Q96KF7 97 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 C5orf66Q9H5L9 145 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 CENPMQ9NSP4 180 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 PPP4R1LQ9P1A2 415 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 FTCDNL1E5RQL4 147 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 SYT7O43581 403 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 GSTP1P09211 210 aaKnown RBP17.32■□□□□ 0.36
HMG20B-213ENST00000488973 ATXN8OSP0DMR3 200 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 CBR1P16152 277 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 FMODQ06828 376 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 PLCXD2Q0VAA5 305 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 ZP4Q12836 540 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 GFOD2Q3B7J2 385 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 TMEM92Q6UXU6 159 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 NAA40Q86UY6 237 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 TMEM230Q96A57 120 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 RHOFQ9HBH0 211 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 WIF1Q9Y5W5 379 aa17.32■□□□□ 0.36
HMG20B-213ENST00000488973 IGKV3D-11A0A0A0MRZ8 115 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 MSGN1A6NI15 193 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 C10orf142B7Z368 130 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 CAV2P51636 162 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 EMP2P54851 167 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 ELAVL1Q15717 326 aaKnown RBP17.31■□□□□ 0.36
HMG20B-213ENST00000488973 ANGPTL5Q86XS5 388 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 C9orf40Q8IXQ3 194 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 KDM8Q8N371 416 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 TCTEX1D2Q8WW35 142 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 PDE7BQ9NP56 450 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 FLVCR1Q9Y5Y0 555 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 MS4A18H0YCH9 400 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 IGHV4-34P06331 123 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 ABCD3P28288 659 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 DAP3P51398 398 aaKnown RBP17.31■□□□□ 0.36
HMG20B-213ENST00000488973 DLX2Q07687 328 aaPredicted RBP17.31■□□□□ 0.36
HMG20B-213ENST00000488973 MS4A18Q3C1V0 323 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.31■□□□□ 0.36
HMG20B-213ENST00000488973 PTCRAQ6ISU1 281 aaPredicted RBP17.31■□□□□ 0.36
HMG20B-213ENST00000488973 KLHL24Q6TFL4 600 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 CLEC18BQ6UXF7 455 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 SCGB3A2Q96PL1 93 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 KCNK17Q96T54 332 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 LPAR5Q9H1C0 372 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 DNAJB11Q9UBS4 358 aa17.31■□□□□ 0.36
HMG20B-213ENST00000488973 NPIPA5E9PKD4 350 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 MBTPS2O43462 519 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 LY86O95711 162 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 ZNF93P35789 620 aaPredicted RBP17.3■□□□□ 0.36
HMG20B-213ENST00000488973 CLDN6P56747 220 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 EIF5AP63241 154 aaKnown RBP17.3■□□□□ 0.36
HMG20B-213ENST00000488973 ROBO4Q8WZ75 1007 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 SLC39A7Q92504 469 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 PBOV1Q9GZY1 135 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 TMPRSS5Q9H3S3 457 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 SOHLH2Q9NX45 425 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 OR5AC2Q9NZP5 309 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 NPIPA1Q9UND3 350 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 REV3LO60673 3130 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 RANBP2P49792 3224 aaKnown RBP17.3■□□□□ 0.36
HMG20B-213ENST00000488973 NPIPB13A6NJU9 1138 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 C1orf196B1AJZ1 125 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 NPIPB4C9JG80 1138 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 ZNF217O75362 1048 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 THEGLP0DJG4 465 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 CASP6P55212 293 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 MRPS21P82921 87 aaKnown RBP17.3■□□□□ 0.36
HMG20B-213ENST00000488973 EIF5AL1Q6IS14 154 aaKnown RBP17.3■□□□□ 0.36
HMG20B-213ENST00000488973 COX15Q7KZN9 410 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 REC114Q7Z4M0 266 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 MISPQ8IVT2 679 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 OR13C9Q8NGT0 318 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 OR2I1PQ8NGU4 316 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 NICN1Q9BSH3 213 aa17.3■□□□□ 0.36
HMG20B-213ENST00000488973 TXNL1O43396 289 aa17.29■□□□□ 0.36
HMG20B-213ENST00000488973 ADAP1O75689 374 aa17.29■□□□□ 0.36
HMG20B-213ENST00000488973 CSTBP04080 98 aaKnown RBP17.29■□□□□ 0.36
HMG20B-213ENST00000488973 PET100P0DJ07 73 aa17.29■□□□□ 0.36
HMG20B-213ENST00000488973 IL11P20809 199 aa17.29■□□□□ 0.36
HMG20B-213ENST00000488973 SSPNQ14714 243 aa17.29■□□□□ 0.36
HMG20B-213ENST00000488973 PEG10Q86TG7 708 aaKnown RBP17.29■□□□□ 0.36
HMG20B-213ENST00000488973 RTN4RL2Q86UN3 420 aa17.29■□□□□ 0.36
HMG20B-213ENST00000488973 ZNF101Q8IZC7 436 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms