RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 HCKP08631 526 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 SLC2A1P11166 492 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 PRF1P14222 555 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 MSR1P21757 451 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 GUCA1AP43080 201 aaPredicted RBP12.54□□□□□ -0.4
ABCB1-207ENST00000488737 ALDH3B1P43353 468 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 ECH1Q13011 328 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 PRAMEF20Q5VT98 475 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 FAM57BQ71RH2 274 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 OR4K15Q8NH41 348 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 OR1S1Q8NH92 325 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 M1APQ8TC57 530 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 IFI44Q8TCB0 444 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 ST8SIA2Q92186 375 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 FAM71F1Q96KD3 344 aaPredicted RBP12.54□□□□□ -0.4
ABCB1-207ENST00000488737 IMMP1LQ96LU5 166 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 OCSTAMPQ9BR26 566 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 URM1Q9BTM9 101 aaKnown RBP12.54□□□□□ -0.4
ABCB1-207ENST00000488737 NELFAQ9H3P2 528 aa12.54□□□□□ -0.4
ABCB1-207ENST00000488737 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.54□□□□□ -0.4
ABCB1-207ENST00000488737 A0A0U1RQV5 110 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 KANTRA0A1W2PQU2 76 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 BCL2L11O43521 198 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 SPDEFO95238 335 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 KLK3P07288 261 aaPredicted RBP12.53□□□□□ -0.4
ABCB1-207ENST00000488737 FGF2P09038 288 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 THBS4P35443 961 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 NUP62P37198 522 aaPredicted RBP12.53□□□□□ -0.4
ABCB1-207ENST00000488737 OR3A4PP47883 348 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 DSCR4P56555 118 aaPredicted RBP12.53□□□□□ -0.4
ABCB1-207ENST00000488737 HIST1H3AP68431 136 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 TRA2AQ13595 282 aaKnown RBP eCLIP12.53□□□□□ -0.4
ABCB1-207ENST00000488737 SLC22A6Q4U2R8 563 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 HIST2H3PS2Q5TEC6 136 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 Q6ZSR3 168 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 HIST2H3AQ71DI3 136 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 TMEM104Q8NE00 496 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 GJC3Q8NFK1 279 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 ST8SIA4Q92187 359 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 FBXW5Q969U6 566 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 TMEM41AQ96HV5 264 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 NAA11Q9BSU3 229 aaPredicted RBP12.53□□□□□ -0.4
ABCB1-207ENST00000488737 ZNF416Q9BWM5 594 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 PPA2Q9H2U2 334 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 AKIRIN1Q9H9L7 192 aaPredicted RBP12.53□□□□□ -0.4
ABCB1-207ENST00000488737 HPP00738 406 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 COX6A1P12074 109 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 LIFP15018 202 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 PLAC9Q5JTB6 97 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 JMJD6Q6NYC1 403 aaPredicted RBP12.53□□□□□ -0.4
ABCB1-207ENST00000488737 ACOT7LQ6ZUV0 252 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 UBALD2Q8IYN6 164 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 FAM89BQ8N5H3 189 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 PNLDC1Q8NA58 520 aaKnown RBP12.53□□□□□ -0.4
ABCB1-207ENST00000488737 GALNT11Q8NCW6 608 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 TERB2Q8NHR7 220 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 PPP1R1CQ8WVI7 109 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 INTS12Q96CB8 462 aaKnown RBP12.53□□□□□ -0.4
ABCB1-207ENST00000488737 PHYHIPLQ96FC7 376 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 PGAM5Q96HS1 289 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 SPACA5Q96QH8 159 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 SOX7Q9BT81 388 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 SPEF1Q9Y4P9 236 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 V9GYS6 101 aa12.53□□□□□ -0.4
ABCB1-207ENST00000488737 TECTAO75443 2155 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 DBX1A6NMT0 343 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 C9J4A7 227 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 MFNGO00587 321 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 SOCS1O15524 211 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 SCO1O75880 301 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 APOC1P02654 83 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 PMP2P02689 132 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 RLN2P04090 185 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 UMODP07911 640 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 LIPCP11150 499 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 KLK2P20151 261 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 SSR4P51571 173 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 CSNK2A1P68400 391 aaPredicted RBP12.52□□□□□ -0.41
ABCB1-207ENST00000488737 SGCAQ16586 387 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 MICBQ29980 383 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 RNF144BQ7Z419 303 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 WDR5BQ86VZ2 330 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 PAQR8Q8TEZ7 354 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 C10orf35Q96D05 121 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 LINC00052Q96N35 136 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 SCGB3A2Q96PL1 93 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 GPER1Q99527 375 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 ZNF160Q9HCG1 818 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 SH2D2AQ9NP31 389 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 RASL12Q9NYN1 266 aa12.52□□□□□ -0.41
ABCB1-207ENST00000488737 LOC100509620A0A075B734 347 aa12.51□□□□□ -0.41
ABCB1-207ENST00000488737 IGKV1-9A0A0C4DH69 117 aa12.51□□□□□ -0.41
ABCB1-207ENST00000488737 RNF222A6NCQ9 220 aa12.51□□□□□ -0.41
ABCB1-207ENST00000488737 D6RAR5 112 aa12.51□□□□□ -0.41
ABCB1-207ENST00000488737 NPIPA2E9PIF3 369 aa12.51□□□□□ -0.41
ABCB1-207ENST00000488737 NPIPA3F8WFD2 350 aa12.51□□□□□ -0.41
ABCB1-207ENST00000488737 CCSO14618 274 aa12.51□□□□□ -0.41
ABCB1-207ENST00000488737 OTX1P32242 354 aaPredicted RBP12.51□□□□□ -0.41
ABCB1-207ENST00000488737 SUCLG1P53597 346 aaKnown RBP12.51□□□□□ -0.41
ABCB1-207ENST00000488737 TMEM50BP56557 158 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms