RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ODF4Q2M2E3 257 aa8.81□□□□□ -1
SKA1-204ENST00000488454 MST1LQ2TV78 715 aa8.81□□□□□ -1
SKA1-204ENST00000488454 ALKBH6Q3KRA9 238 aa8.81□□□□□ -1
SKA1-204ENST00000488454 CCDC58Q4VC31 144 aa8.81□□□□□ -1
SKA1-204ENST00000488454 WDR38Q5JTN6 314 aa8.81□□□□□ -1
SKA1-204ENST00000488454 TMEM244Q5VVB8 128 aa8.81□□□□□ -1
SKA1-204ENST00000488454 RPL22L1Q6P5R6 122 aaKnown RBP8.81□□□□□ -1
SKA1-204ENST00000488454 OR5AS1Q8N127 324 aa8.81□□□□□ -1
SKA1-204ENST00000488454 FTMTQ8N4E7 242 aa8.81□□□□□ -1
SKA1-204ENST00000488454 CCDC54Q8NEL0 328 aa8.81□□□□□ -1
SKA1-204ENST00000488454 SGCDQ92629 289 aa8.81□□□□□ -1
SKA1-204ENST00000488454 SPSB4Q96A44 273 aa8.81□□□□□ -1
SKA1-204ENST00000488454 TRMT61AQ96FX7 289 aaKnown RBP8.81□□□□□ -1
SKA1-204ENST00000488454 FAM71F1Q96KD3 344 aaPredicted RBP8.81□□□□□ -1
SKA1-204ENST00000488454 VRK1Q99986 396 aaPredicted RBP8.81□□□□□ -1
SKA1-204ENST00000488454 TRAF4Q9BUZ4 470 aaPredicted RBP8.81□□□□□ -1
SKA1-204ENST00000488454 G6PC2Q9NQR9 355 aa8.81□□□□□ -1
SKA1-204ENST00000488454 GPR84Q9NQS5 396 aa8.81□□□□□ -1
SKA1-204ENST00000488454 TMEM100Q9NV29 134 aa8.81□□□□□ -1
SKA1-204ENST00000488454 ST6GALNAC2Q9UJ37 374 aa8.81□□□□□ -1
SKA1-204ENST00000488454 NOP16Q9Y3C1 178 aaKnown RBP8.81□□□□□ -1
SKA1-204ENST00000488454 CADP27708 2225 aa8.81□□□□□ -1
SKA1-204ENST00000488454 ABCA4P78363 2273 aa8.8□□□□□ -1
SKA1-204ENST00000488454 C5orf63A6NC05 138 aa8.8□□□□□ -1
SKA1-204ENST00000488454 TMEM212A6NML5 194 aa8.8□□□□□ -1
SKA1-204ENST00000488454 IQCF6A8MYZ5 107 aa8.8□□□□□ -1
SKA1-204ENST00000488454 E9PI62 339 aa8.8□□□□□ -1
SKA1-204ENST00000488454 P2RY10O00398 339 aa8.8□□□□□ -1
SKA1-204ENST00000488454 SYT7O43581 403 aa8.8□□□□□ -1
SKA1-204ENST00000488454 CD8AP01732 235 aa8.8□□□□□ -1
SKA1-204ENST00000488454 GNALP38405 381 aa8.8□□□□□ -1
SKA1-204ENST00000488454 ZNF81P51508 661 aa8.8□□□□□ -1
SKA1-204ENST00000488454 GTF2A1P52655 376 aaPredicted RBP8.8□□□□□ -1
SKA1-204ENST00000488454 NANOS3P60323 173 aaKnown RBP8.8□□□□□ -1
SKA1-204ENST00000488454 SLC3A1Q07837 685 aa8.8□□□□□ -1
SKA1-204ENST00000488454 RIPPLY1Q0D2K3 151 aa8.8□□□□□ -1
SKA1-204ENST00000488454 KCTD21Q4G0X4 260 aa8.8□□□□□ -1
SKA1-204ENST00000488454 PAMR1Q6UXH9 720 aa8.8□□□□□ -1
SKA1-204ENST00000488454 DOK3Q7L591 496 aa8.8□□□□□ -1
SKA1-204ENST00000488454 PRSS35Q8N3Z0 413 aa8.8□□□□□ -1
SKA1-204ENST00000488454 BHLHE23Q8NDY6 225 aa8.8□□□□□ -1
SKA1-204ENST00000488454 CSNK2A3Q8NEV1 391 aa8.8□□□□□ -1
SKA1-204ENST00000488454 SEMA6DQ8NFY4 1073 aa8.8□□□□□ -1
SKA1-204ENST00000488454 OR8G5Q8NG78 346 aa8.8□□□□□ -1
SKA1-204ENST00000488454 OR13G1Q8NGZ3 307 aa8.8□□□□□ -1
SKA1-204ENST00000488454 OR5AK2Q8NH90 309 aa8.8□□□□□ -1
SKA1-204ENST00000488454 NRGNQ92686 78 aa8.8□□□□□ -1
SKA1-204ENST00000488454 LURAP1Q96LR2 239 aa8.8□□□□□ -1
SKA1-204ENST00000488454 NR1H4Q96RI1 486 aaPredicted RBP8.8□□□□□ -1
SKA1-204ENST00000488454 DIRC2Q96SL1 478 aa8.8□□□□□ -1
SKA1-204ENST00000488454 CACNG6Q9BXT2 260 aa8.8□□□□□ -1
SKA1-204ENST00000488454 SLC22A4Q9H015 551 aa8.8□□□□□ -1
SKA1-204ENST00000488454 RAB1BQ9H0U4 201 aa8.8□□□□□ -1
SKA1-204ENST00000488454 LIME1Q9H400 295 aa8.8□□□□□ -1
SKA1-204ENST00000488454 MYEF2Q9P2K5 600 aaKnown RBP8.8□□□□□ -1
SKA1-204ENST00000488454 PLEKHA6Q9Y2H5 1048 aa8.8□□□□□ -1
SKA1-204ENST00000488454 RTTNQ86VV8 2226 aa8.8□□□□□ -1
SKA1-204ENST00000488454 hCG_38984A0A1B0GV85 526 aa8.79□□□□□ -1
SKA1-204ENST00000488454 LOC390937A0A1W2PQ73 354 aa8.79□□□□□ -1
SKA1-204ENST00000488454 OGG1O15527 345 aa8.79□□□□□ -1
SKA1-204ENST00000488454 TPD52L2O43399 206 aaKnown RBP8.79□□□□□ -1
SKA1-204ENST00000488454 SPRY3O43610 288 aa8.79□□□□□ -1
SKA1-204ENST00000488454 DHRS3O75911 302 aa8.79□□□□□ -1
SKA1-204ENST00000488454 ISG15P05161 165 aa8.79□□□□□ -1
SKA1-204ENST00000488454 HSMCR30P0CW71 290 aa8.79□□□□□ -1
SKA1-204ENST00000488454 NAT2P11245 290 aa8.79□□□□□ -1
SKA1-204ENST00000488454 CD53P19397 219 aa8.79□□□□□ -1
SKA1-204ENST00000488454 TNFSF4P23510 183 aa8.79□□□□□ -1
SKA1-204ENST00000488454 KIR3DL2P43630 455 aa8.79□□□□□ -1
SKA1-204ENST00000488454 MAP2K4P45985 399 aa8.79□□□□□ -1
SKA1-204ENST00000488454 PPOXP50336 477 aa8.79□□□□□ -1
SKA1-204ENST00000488454 CDH15P55291 814 aa8.79□□□□□ -1
SKA1-204ENST00000488454 BDH1Q02338 343 aa8.79□□□□□ -1
SKA1-204ENST00000488454 IRF3Q14653 427 aa8.79□□□□□ -1
SKA1-204ENST00000488454 CDK5R1Q15078 307 aa8.79□□□□□ -1
SKA1-204ENST00000488454 PCGF3Q3KNV8 242 aa8.79□□□□□ -1
SKA1-204ENST00000488454 ZNF773Q6PK81 442 aa8.79□□□□□ -1
SKA1-204ENST00000488454 RDH10Q8IZV5 341 aa8.79□□□□□ -1
SKA1-204ENST00000488454 SPARTQ8N0X7 666 aa8.79□□□□□ -1
SKA1-204ENST00000488454 OR56B2PQ8NGI1 322 aa8.79□□□□□ -1
SKA1-204ENST00000488454 NINJ1Q92982 152 aa8.79□□□□□ -1
SKA1-204ENST00000488454 LYZL4Q96KX0 146 aa8.79□□□□□ -1
SKA1-204ENST00000488454 HIST1H2AAQ96QV6 131 aa8.79□□□□□ -1
SKA1-204ENST00000488454 PLEKHA1Q9HB21 404 aa8.79□□□□□ -1
SKA1-204ENST00000488454 MSL2Q9HCI7 577 aa8.79□□□□□ -1
SKA1-204ENST00000488454 DECR2Q9NUI1 292 aa8.79□□□□□ -1
SKA1-204ENST00000488454 MRPL15Q9P015 296 aaKnown RBP8.79□□□□□ -1
SKA1-204ENST00000488454 ZDHHC8Q9ULC8 765 aa8.79□□□□□ -1
SKA1-204ENST00000488454 HHLA2Q9UM44 414 aa8.79□□□□□ -1
SKA1-204ENST00000488454 A0A087WXM4 84 aa8.78□□□□□ -1
SKA1-204ENST00000488454 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.78□□□□□ -1
SKA1-204ENST00000488454 ZNF816-ZNF321PA0A0X1KG74 233 aa8.78□□□□□ -1
SKA1-204ENST00000488454 PNMA8CA0A1B0GUJ8 204 aa8.78□□□□□ -1
SKA1-204ENST00000488454 LOC107986453A0A1B0GWG9 222 aa8.78□□□□□ -1
SKA1-204ENST00000488454 OR4C45A6NMZ5 311 aa8.78□□□□□ -1
SKA1-204ENST00000488454 C17orf100A8MU93 164 aa8.78□□□□□ -1
SKA1-204ENST00000488454 H3BSH0 61 aa8.78□□□□□ -1
SKA1-204ENST00000488454 ZFPL1O95159 310 aa8.78□□□□□ -1
SKA1-204ENST00000488454 SERPINA3P01011 423 aa8.78□□□□□ -1
SKA1-204ENST00000488454 CELP19835 753 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms