RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TMEM80Q96HE8 168 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 Q96MF0 132 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 SLC30A2Q9BRI3 323 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 ADAT1Q9BUB4 502 aaKnown RBP9.39□□□□□ -0.91
UBE4B-210ENST00000488228 RGCCQ9H4X1 137 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 SAP30LQ9HAJ7 183 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 CYSLTR2Q9NS75 346 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 PAK1IP1Q9NWT1 392 aaPredicted RBP9.39□□□□□ -0.91
UBE4B-210ENST00000488228 CNOT2Q9NZN8 540 aaKnown RBP9.39□□□□□ -0.91
UBE4B-210ENST00000488228 CLEC2DQ9UHP7 191 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 CACNG2Q9Y698 323 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 TEP1Q99973 2627 aaKnown RBP9.39□□□□□ -0.91
UBE4B-210ENST00000488228 MED13LQ71F56 2210 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 YLPM1P49750 1951 aaKnown RBP9.38□□□□□ -0.91
UBE4B-210ENST00000488228 A0A0U1RQV5 110 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 LOC107986453A0A1B0GWG9 222 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 ACOD1A6NK06 481 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 E9PI62 339 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 F5H5P2 479 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 CDC14BO60729 498 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 F12P00748 615 aaPredicted RBP9.38□□□□□ -0.91
UBE4B-210ENST00000488228 IGLV3-1P01715 115 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 ADH4P08319 380 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 MYL12AP19105 171 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 CFL1P23528 166 aaKnown RBP9.38□□□□□ -0.91
UBE4B-210ENST00000488228 C21orf33P30042 268 aaPredicted RBP9.38□□□□□ -0.91
UBE4B-210ENST00000488228 LIPAP38571 399 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 TNFAIP6P98066 277 aaPredicted RBP9.38□□□□□ -0.91
UBE4B-210ENST00000488228 DOC2BQ14184 412 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 SHEQ5VZ18 495 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 XAF1Q6GPH4 301 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 CLEC2AQ6UVW9 174 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 DNM1P46Q6ZS02 220 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 TGIF2LYQ8IUE0 185 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 ELMOD2Q8IZ81 293 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 SYS1Q8N2H4 156 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 ZNF786Q8N393 782 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 STX19Q8N4C7 294 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 ZNF540Q8NDQ6 660 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 OR2G2Q8NGZ5 317 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 ITLN1Q8WWA0 313 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 NEU4Q8WWR8 484 aaPredicted RBP9.38□□□□□ -0.91
UBE4B-210ENST00000488228 YIPF5Q969M3 257 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 MRPL48Q96GC5 212 aaKnown RBP9.38□□□□□ -0.91
UBE4B-210ENST00000488228 OR2V2Q96R30 315 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 PAPOLGQ9BWT3 736 aaKnown RBP9.38□□□□□ -0.91
UBE4B-210ENST00000488228 PPP1R3EQ9H7J1 279 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 PLCXD1Q9NUJ7 323 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 FKBP14Q9NWM8 211 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 UBAP1Q9NZ09 502 aa9.38□□□□□ -0.91
UBE4B-210ENST00000488228 EXOSC1Q9Y3B2 195 aaKnown RBP9.38□□□□□ -0.91
UBE4B-210ENST00000488228 IGHV4-30-2A0A087WSY4 118 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 A0A1B0GTI1 187 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 LMX1BO60663 402 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 CD55P08174 381 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 HTR1AP08908 422 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 TACSTD2P09758 323 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 FAHP16930 419 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 OR8G1Q15617 311 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 FAM209AQ5JX71 171 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 KLBQ86Z14 1044 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 KLHL36Q8N4N3 616 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 OR13G1Q8NGZ3 307 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 UBASH3BQ8TF42 649 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 DECR2Q9NUI1 292 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 TMEM100Q9NV29 134 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 DCAF16Q9NXF7 216 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 NKIRAS2Q9NYR9 191 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 TREM2Q9NZC2 230 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 MRPL15Q9P015 296 aaKnown RBP9.37□□□□□ -0.91
UBE4B-210ENST00000488228 ZNF391Q9UJN7 358 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 ZDHHC8Q9ULC8 765 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 RHBDD3Q9Y3P4 386 aa9.37□□□□□ -0.91
UBE4B-210ENST00000488228 IGHV1-69-2A0A0G2JMI3 117 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 A0A1B0GVI7 797 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 A0A1B0GWJ7 208 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 OR4C45A6NMZ5 311 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 ANKRD30BLA7E2S9 258 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 PTGES3LE9PB15 166 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 MYL12BO14950 172 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 RP2O75695 350 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 DHRS3O75911 302 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 LALBAP00709 142 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 CDK1P06493 297 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 UBCP0CG48 685 aaKnown RBP9.36□□□□□ -0.91
UBE4B-210ENST00000488228 CCL1P22362 96 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 TNFSF4P23510 183 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 CRHBPP24387 322 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 PDLIM4P50479 330 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 GTF2A1P52655 376 aaPredicted RBP9.36□□□□□ -0.91
UBE4B-210ENST00000488228 SLC35A2P78381 396 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 DMRTC1Q5HYR2 192 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 PRAMEF6Q5VXH4 476 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 FDX2Q6P4F2 183 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 PRSS57Q6UWY2 283 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 KCTD20Q7Z5Y7 419 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 RDH10Q8IZV5 341 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 ZFP41Q8N8Y5 198 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 CSNK2A3Q8NEV1 391 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 OR10AC1Q8NH08 325 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms