RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 NKIRAS2Q9NYR9 191 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 SLC22A13Q9Y226 551 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 CAB39Q9Y376 341 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-219ENST00000488186 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-219ENST00000488186 A0A1B0GVI7 797 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 ZSCAN5BA6NJL1 495 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 LY6HO94772 140 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 CSF3P09919 207 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 ANOS1P23352 680 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 PDLIM4P50479 330 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 ETV1P50549 477 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 OR8G1Q15617 311 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 LAIR2Q6ISS4 152 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 ZNF786Q8N393 782 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 HAVCR2Q8TDQ0 301 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 SLC30A2Q9BRI3 323 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 JAM3Q9BX67 310 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 ISG20L2Q9H9L3 353 aaKnown RBP13.4□□□□□ -0.26
C9orf3-219ENST00000488186 G6PC2Q9NQR9 355 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 MRPL15Q9P015 296 aaKnown RBP13.4□□□□□ -0.26
C9orf3-219ENST00000488186 BLOC1S6Q9UL45 172 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 ERGIC3Q9Y282 383 aa13.4□□□□□ -0.26
C9orf3-219ENST00000488186 VPS13CQ709C8 3753 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 hCG_38984A0A1B0GV85 526 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 P2RY10O00398 339 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 MYL12BO14950 172 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 GMDSO60547 372 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 SRSF10O75494 262 aaKnown RBP13.39□□□□□ -0.27
C9orf3-219ENST00000488186 TTRP02766 147 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 CCDC159P0C7I6 412 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 LIMS3P0CW19 117 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 LIMS4P0CW20 117 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 ATP6V1B1P15313 513 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 TNFRSF1AP19438 455 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 CA6P23280 308 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 EEF1B2P24534 225 aaKnown RBP13.39□□□□□ -0.27
C9orf3-219ENST00000488186 SRP9P49458 86 aaKnown RBP13.39□□□□□ -0.27
C9orf3-219ENST00000488186 MZT1Q08AG7 82 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 RIPPLY1Q0D2K3 151 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 RBM48Q5RL73 367 aaKnown RBP13.39□□□□□ -0.27
C9orf3-219ENST00000488186 Q6ZR03 302 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 DOK3Q7L591 496 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 SEMA6DQ8NFY4 1073 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 FAM168AQ92567 244 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 RDH5Q92781 318 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 ITFG2Q969R8 447 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 PELI1Q96FA3 418 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 LYZL4Q96KX0 146 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 HIST1H2AAQ96QV6 131 aa13.39□□□□□ -0.27
C9orf3-219ENST00000488186 FLNAP21333 2647 aaKnown RBP13.38□□□□□ -0.27
C9orf3-219ENST00000488186 SYT7O43581 403 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 DENRO43583 198 aaKnown RBP13.38□□□□□ -0.27
C9orf3-219ENST00000488186 CDC14BO60729 498 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 LILRA1O75019 489 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 HPXP02790 462 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 HLA-DPB1P04440 258 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 ADH4P08319 380 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 UBCP0CG48 685 aaKnown RBP13.38□□□□□ -0.27
C9orf3-219ENST00000488186 ALKBH1Q13686 389 aaKnown RBP13.38□□□□□ -0.27
C9orf3-219ENST00000488186 WDR38Q5JTN6 314 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 TMEM244Q5VVB8 128 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 TGIF2LYQ8IUE0 185 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 ZNF525Q8N782 197 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 ZNF676Q8N7Q3 588 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 SPERTQ8NA61 448 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 OR10AD1Q8NGE0 317 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 OR2G2Q8NGZ5 317 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 OR8S1Q8NH09 359 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 GATAD2BQ8WXI9 593 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 PIGCQ92535 297 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 Q96MF0 132 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 ADAT1Q9BUB4 502 aaKnown RBP13.38□□□□□ -0.27
C9orf3-219ENST00000488186 PAPOLGQ9BWT3 736 aaKnown RBP13.38□□□□□ -0.27
C9orf3-219ENST00000488186 CCDC90BQ9GZT6 254 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 BABAM2Q9NXR7 383 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 IL19Q9UHD0 177 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 CLEC2DQ9UHP7 191 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 PIGLQ9Y2B2 252 aa13.38□□□□□ -0.27
C9orf3-219ENST00000488186 ZNF469Q96JG9 3925 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-219ENST00000488186 LOC390937A0A1W2PQ73 354 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 ANXA2P2A6NMY6 339 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 H0YL77 283 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 H3BSH0 61 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 DHRS3O75911 302 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 CDK1P06493 297 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 CD55P08174 381 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 RPSAP08865 295 aaKnown RBP13.37□□□□□ -0.27
C9orf3-219ENST00000488186 ZNF12P17014 697 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 C21orf33P30042 268 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-219ENST00000488186 CCR9P51686 369 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 MVKQ03426 396 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 OR8B8Q15620 311 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 HFEQ30201 348 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 OR2G6Q5TZ20 316 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 FDX2Q6P4F2 183 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 KLBQ86Z14 1044 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 KRTAP1-3Q8IUG1 177 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 PRSS35Q8N3Z0 413 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 CCDC54Q8NEL0 328 aa13.37□□□□□ -0.27
C9orf3-219ENST00000488186 OR52N1Q8NH53 320 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms