RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ZNF841Q6ZN19 808 aa9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 SLC16A9Q7RTY1 509 aa9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 SPATA24Q86W54 205 aa9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 OR8S1Q8NH09 359 aa9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 CANT1Q8WVQ1 401 aa9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 SGK3Q96BR1 496 aa9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 REEP6Q96HR9 211 aa9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 PCGF1Q9BSM1 259 aa9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 TNFRSF19Q9NS68 423 aa9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 MRPL15Q9P015 296 aaKnown RBP9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 NOP16Q9Y3C1 178 aaKnown RBP9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 PCDHGB1Q9Y5G3 927 aa9.41□□□□□ -0.9
NIPAL3-207ENST00000488155 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 ANKRD30BLA7E2S9 258 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 PHYHO14832 338 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 SELENOFO60613 162 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 E2F6O75461 281 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 GLCEO94923 617 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 SFTPBP07988 381 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 EGR1P18146 543 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 GRK5P34947 590 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 PSMB10P40306 273 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 NAA10P41227 235 aaPredicted RBP9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 BLVRAP53004 296 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 ZNF121P58317 390 aaPredicted RBP9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 GMFBP60983 142 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 CSNK2BP67870 215 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 ELF3P78545 371 aaPredicted RBP9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 FAM3AP98173 230 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 KLHL12Q53G59 568 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 RUSC1-AS1Q66K80 236 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 PLBD1Q6P4A8 553 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 GCSAMQ8N6F7 178 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 THEM6Q8WUY1 208 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 LRRC29Q8WV35 223 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 DACT3Q96B18 629 aaPredicted RBP9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 UPRTQ96BW1 309 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 PGAM5Q96HS1 289 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 MARCH7Q9H992 704 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 SMURF1Q9HCE7 757 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 ZNF319Q9P2F9 582 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 ERVK-18Q9QC07 812 aa9.4□□□□□ -0.9
NIPAL3-207ENST00000488155 KIAA2026Q5HYC2 2103 aa9.4□□□□□ -0.91
NIPAL3-207ENST00000488155 DSCAML1Q8TD84 2053 aa9.4□□□□□ -0.91
NIPAL3-207ENST00000488155 TRAV38-1A0A0B4J264 116 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 OOEPA6NGQ2 149 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 PRR23D1E9PI22 279 aaPredicted RBP9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 H2BFMP0C1H6 154 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 PRR23D2P0DMB1 279 aaPredicted RBP9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 HKR1P10072 659 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 PAICSP22234 425 aaKnown RBP9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 RPS7P62081 194 aaKnown RBP9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 SLC9A3R2Q15599 337 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 DEFB112Q30KQ8 113 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 TMEM236Q5W0B7 351 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 CD300LDQ6UXZ3 194 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 SHFQ7M4L6 423 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 WDR86Q86TI4 376 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 FAM90A1Q86YD7 464 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 CPOQ8IVL8 374 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 TIGD4Q8IY51 512 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 FGFRL1Q8N441 504 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 SPERTQ8NA61 448 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 BBS1Q8NFJ9 593 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 RNF133Q8WVZ7 376 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 SPSB4Q96A44 273 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 SEH1LQ96EE3 360 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 C1orf21Q9H246 121 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 TOR3AQ9H497 397 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 C14orf119Q9NWQ9 140 aa9.39□□□□□ -0.91
NIPAL3-207ENST00000488155 TRRAPQ9Y4A5 3859 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 hCG_38984A0A1B0GV85 526 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 A0A1B0GW55 424 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 AQP12BA6NM10 295 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 ANKRD65E5RJM6 399 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 ENSAO43768 121 aaKnown RBP9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 FCN3O75636 299 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 FSTL3O95633 263 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 PTBP3O95758 552 aaKnown RBP9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 PLATP00750 562 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 LYNP07948 512 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 DUX4L2P0CJ85 424 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 DUX4L3P0CJ86 424 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 DUX4L4P0CJ87 422 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 DUX4L5P0CJ88 424 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 DUX4L6P0CJ89 424 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 DUX4L7P0CJ90 424 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 OMGP23515 440 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 CPT2P23786 658 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 DDOSTP39656 456 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 MTNR1AP48039 350 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 GSK3AP49840 483 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 HCCSP53701 268 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 MZT1Q08AG7 82 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 FOXL1Q12952 345 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 KCNJ8Q15842 424 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 TUSC1Q2TAM9 212 aa9.38□□□□□ -0.91
NIPAL3-207ENST00000488155 DNAL1Q4LDG9 190 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms