RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 H2BFMP0C1H6 154 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 ALOX5APP20292 161 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 TNFSF4P23510 183 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 SLC15A1P46059 708 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 SEC61A1P61619 476 aaKnown RBP6.02□□□□□ -1.45
UBE4B-209ENST00000487244 FAM3AP98173 230 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 MFGE8Q08431 387 aaPredicted RBP6.02□□□□□ -1.45
UBE4B-209ENST00000487244 MAB21L1Q13394 359 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 MPPED2Q15777 294 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 CR1LQ2VPA4 569 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 ZIK1Q3SY52 487 aaPredicted RBP6.02□□□□□ -1.45
UBE4B-209ENST00000487244 CHRFAM7AQ494W8 412 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 SLC35D3Q5M8T2 416 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 FAM201AQ5SY85 155 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 PRAMEF6Q5VXH4 476 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 SHFQ7M4L6 423 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 SSX6Q7RTT6 188 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 SLC16A9Q7RTY1 509 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 CBR4Q8N4T8 237 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 C19orf18Q8NEA5 215 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 SPRYD4Q8WW59 207 aaPredicted RBP6.02□□□□□ -1.45
UBE4B-209ENST00000487244 UBE2FQ969M7 185 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 SPSB4Q96A44 273 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 SGK3Q96BR1 496 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 TIMD4Q96H15 378 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 LYZL4Q96KX0 146 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 MBOAT4Q96T53 435 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 GAL3ST1Q99999 423 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 ADAT1Q9BUB4 502 aaKnown RBP6.02□□□□□ -1.45
UBE4B-209ENST00000487244 TEX12Q9BXU0 123 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 ADGRL4Q9HBW9 690 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 TMEM100Q9NV29 134 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 UBAP1Q9NZ09 502 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 KCNS2Q9ULS6 477 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 NPTNQ9Y639 398 aa6.02□□□□□ -1.45
UBE4B-209ENST00000487244 GGT3PA6NGU5 568 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 B4DSR2 109 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 ANKRD65E5RJM6 399 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 E9PQ18 207 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 TMEM178BH3BS89 294 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 XRCC2O43543 280 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 PLPP2O43688 288 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 FAM20BO75063 409 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 SBK2P0C263 348 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 TNFRSF1AP19438 455 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 ACKR3P25106 362 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 SRP9P49458 86 aaKnown RBP6.01□□□□□ -1.45
UBE4B-209ENST00000487244 RAD23AP54725 363 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 BTG1P62324 171 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 SRSF2Q01130 221 aaKnown RBP6.01□□□□□ -1.45
UBE4B-209ENST00000487244 OR8G1Q15617 311 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 TIGD6Q17RP2 521 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 KRTAP21-3Q3LHN1 58 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 LCN1P1Q5VSP4 162 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 NXNL2Q5VZ03 156 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 ZFP1Q6P2D0 407 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 PLEKHG7Q6ZR37 379 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 RHOUQ7L0Q8 258 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 MEPCEQ7L2J0 689 aaKnown RBP6.01□□□□□ -1.45
UBE4B-209ENST00000487244 KRT77Q7Z794 578 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 WDR86Q86TI4 376 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.01□□□□□ -1.45
UBE4B-209ENST00000487244 SLC35F2Q8IXU6 374 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 OR8B12Q8NGG6 310 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 OR51G2Q8NGK0 314 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 RAB1CQ92928 201 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 PPP1R14AQ96A00 147 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 MISP3Q96FF7 219 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 REEP6Q96HR9 211 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 PGAM5Q96HS1 289 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 OR8B4Q96RC9 309 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 CNN2Q99439 309 aaKnown RBP6.01□□□□□ -1.45
UBE4B-209ENST00000487244 TBX5Q99593 518 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 SLC29A1Q99808 456 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 RBM4BQ9BQ04 359 aaKnown RBP6.01□□□□□ -1.45
UBE4B-209ENST00000487244 BEX2Q9BXY8 128 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 PRRG3Q9BZD7 231 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 YIPF3Q9GZM5 350 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 WNT10AQ9GZT5 417 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 SHARPINQ9H0F6 387 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 TOR3AQ9H497 397 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 S100A14Q9HCY8 104 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 UFSP2Q9NUQ7 469 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 HIF1ANQ9NWT6 349 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 TMEM160Q9NX00 188 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 FAM206AQ9NX38 181 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 AASSQ9UDR5 926 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 LAMP5Q9UJQ1 280 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 CDC42EP3Q9UKI2 254 aa6.01□□□□□ -1.45
UBE4B-209ENST00000487244 STAB1Q9NY15 2570 aa6□□□□□ -1.45
UBE4B-209ENST00000487244 SRSF10O75494 262 aaKnown RBP6□□□□□ -1.45
UBE4B-209ENST00000487244 PNPP00491 289 aa6□□□□□ -1.45
UBE4B-209ENST00000487244 FAM157CP0CG43 387 aa6□□□□□ -1.45
UBE4B-209ENST00000487244 ZFP36P26651 326 aaKnown RBP6□□□□□ -1.45
UBE4B-209ENST00000487244 CD200P41217 278 aa6□□□□□ -1.45
UBE4B-209ENST00000487244 ALDH3A2P51648 485 aa6□□□□□ -1.45
UBE4B-209ENST00000487244 DVL1P1P54792 670 aaPredicted RBP6□□□□□ -1.45
UBE4B-209ENST00000487244 CXCR4P61073 352 aa6□□□□□ -1.45
UBE4B-209ENST00000487244 CSNK2BP67870 215 aa6□□□□□ -1.45
UBE4B-209ENST00000487244 LCN2P80188 198 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms