RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 SLC22A4Q9H015 551 aa12.13□□□□□ -0.47
PFDN4-204ENST00000487129 ABCD2Q9UBJ2 740 aa12.13□□□□□ -0.47
PFDN4-204ENST00000487129 PRPF19Q9UMS4 504 aaKnown RBP12.13□□□□□ -0.47
PFDN4-204ENST00000487129 POLR1DQ9Y2S0 133 aa12.13□□□□□ -0.47
PFDN4-204ENST00000487129 F5H5K5 113 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 IFNW1P05000 195 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 IGLL1P15814 213 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 YAP1P46937 504 aaKnown RBP12.12□□□□□ -0.47
PFDN4-204ENST00000487129 PSME3P61289 254 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 ZNF92Q03936 586 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 ACSM1Q08AH1 577 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 TRAP1Q12931 704 aaKnown RBP12.12□□□□□ -0.47
PFDN4-204ENST00000487129 HABP2Q14520 560 aaPredicted RBP12.12□□□□□ -0.47
PFDN4-204ENST00000487129 LY6EQ16553 131 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 SNAI3Q3KNW1 292 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 IFI44LQ53G44 452 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 VTCN1Q7Z7D3 282 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.12□□□□□ -0.47
PFDN4-204ENST00000487129 NDUFA11Q86Y39 141 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 SLC26A10Q8NG04 563 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 PIFOQ8TCI5 191 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 R3HDM4Q96D70 268 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 SSX3Q99909 188 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 KCTD14Q9BQ13 255 aaPredicted RBP12.12□□□□□ -0.47
PFDN4-204ENST00000487129 ZNF702PQ9H963 129 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 SIGLEC7Q9Y286 467 aa12.12□□□□□ -0.47
PFDN4-204ENST00000487129 EPPK1P58107 5090 aaKnown RBP12.12□□□□□ -0.47
PFDN4-204ENST00000487129 WI2-2373I1.2A0A1W2PRP0 233 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 SOCS2O14508 198 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 ACOT8O14734 319 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 PTP4A3O75365 173 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 FBXO24O75426 580 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 ZNF682O95780 498 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 SERPINA1P01009 418 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 LCATP04180 440 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 GRPP07492 148 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 PAX6P26367 422 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 TGM4P49221 684 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 EMX1Q04741 257 aaPredicted RBP12.11□□□□□ -0.47
PFDN4-204ENST00000487129 TRAM2Q15035 370 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 GPR139Q6DWJ6 353 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 MBOAT2Q6ZWT7 520 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 MRPL21Q7Z2W9 205 aaKnown RBP12.11□□□□□ -0.47
PFDN4-204ENST00000487129 ADCK1Q86TW2 530 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 LINC00346Q8IVM7 164 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 RNF113BQ8IZP6 322 aaKnown RBP12.11□□□□□ -0.47
PFDN4-204ENST00000487129 CMTM4Q8IZR5 234 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 Q8N2B8 174 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 OR2AE1Q8NHA4 323 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 ATF6BQ99941 703 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 CITED2Q99967 270 aaPredicted RBP12.11□□□□□ -0.47
PFDN4-204ENST00000487129 FNDC11Q9BVV2 318 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 FAM107BQ9H098 131 aa12.11□□□□□ -0.47
PFDN4-204ENST00000487129 MRPL15Q9P015 296 aaKnown RBP12.11□□□□□ -0.47
PFDN4-204ENST00000487129 NOP16Q9Y3C1 178 aaKnown RBP12.11□□□□□ -0.47
PFDN4-204ENST00000487129 A6NLC8 198 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 TXNDC12O95881 172 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 MUC1P15941 1255 aaPredicted RBP12.1□□□□□ -0.47
PFDN4-204ENST00000487129 GGT2P36268 569 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 KRTAP10-11P60412 298 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 MALLQ13021 153 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 ZBTB37Q5TC79 503 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 PGM2L1Q6PCE3 622 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 FKBP9P1Q75LS8 142 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 TSEN54Q7Z6J9 526 aaKnown RBP12.1□□□□□ -0.47
PFDN4-204ENST00000487129 PIGWQ7Z7B1 504 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 OR4F17Q8NGA8 305 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 SLC7A13Q8TCU3 470 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 HSH2DQ96JZ2 352 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 OR4F4Q96R69 305 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 MEGF9Q9H1U4 602 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 SPAG4Q9NPE6 437 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 RYR2Q92736 4967 aa12.1□□□□□ -0.47
PFDN4-204ENST00000487129 hCG_1807616A0A1W2PRN6 198 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 NDUFB2O95178 105 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 OTX1P32242 354 aaPredicted RBP12.09□□□□□ -0.47
PFDN4-204ENST00000487129 GNGT1P63211 74 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 CSNK2BP67870 215 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 ECH1Q13011 328 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 IKZF1Q13422 519 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 AANATQ16613 207 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 MICBQ29980 383 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 LRRC75BQ2VPJ9 315 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 GLYATL3Q5SZD4 288 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 ATPAF1Q5TC12 328 aaPredicted RBP12.09□□□□□ -0.47
PFDN4-204ENST00000487129 STUMQ69YW2 141 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 GLYATQ6IB77 296 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 WDR82Q6UXN9 313 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 ZNF730Q6ZMV8 503 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 CYP4Z1Q86W10 505 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 OR6V1Q8N148 313 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 PAPD5Q8NDF8 572 aaKnown RBP12.09□□□□□ -0.47
PFDN4-204ENST00000487129 LRRC29Q8WV35 223 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 FAM162AQ96A26 154 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 MAP6Q96JE9 813 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 CLPTM1LQ96KA5 538 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 PITX2Q99697 317 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 NPFFR1Q9GZQ6 430 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 WNT10AQ9GZT5 417 aa12.09□□□□□ -0.47
PFDN4-204ENST00000487129 ANKRD19PQ9H560 264 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms