RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 HSD11B1P28845 292 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 SLC15A1P46059 708 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 NPY4RP50391 375 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 GRB2P62993 217 aaKnown RBP20.37■□□□□ 0.85
LIME1-206ENST00000487026 FAM3AP98173 230 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 TIGD6Q17RP2 521 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 CD276Q5ZPR3 534 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 RUSC1-AS1Q66K80 236 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 SHISA2Q6UWI4 295 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 FAM57BQ71RH2 274 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 OR6N2Q8NGY6 317 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 ZDHHC16Q969W1 377 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 CCDC124Q96CT7 223 aaKnown RBP20.37■□□□□ 0.85
LIME1-206ENST00000487026 REEP6Q96HR9 211 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 INTS14Q96SY0 518 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 BRD7Q9NPI1 651 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 C14orf119Q9NWQ9 140 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 ANKRD30BLA7E2S9 258 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 FCN3O75636 299 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 GSTT1P30711 240 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 BLVRAP53004 296 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 GFOD2Q3B7J2 385 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 GPR157Q5UAW9 335 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 CD300LDQ6UXZ3 194 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 WDR86Q86TI4 376 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 FAM90A1Q86YD7 464 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 C11orf53Q8IXP5 236 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 OR8S1Q8NH09 359 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 TEX47Q8TBZ9 253 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 GIPC3Q8TF64 312 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 CHID1Q9BWS9 393 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 OR51V1Q9H2C8 321 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 OPA3Q9H6K4 179 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 ZNF319Q9P2F9 582 aa20.36■□□□□ 0.85
LIME1-206ENST00000487026 ZNF879B4DU55 563 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 CST1P01037 141 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 LHBP01229 141 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 RAP2AP10114 183 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 CALB2P22676 271 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 OMGP23515 440 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 POU1F1P28069 291 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 CFHR2P36980 270 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 DDOSTP39656 456 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 ZNF121P58317 390 aaPredicted RBP20.35■□□□□ 0.85
LIME1-206ENST00000487026 ELF3P78545 371 aaPredicted RBP20.35■□□□□ 0.85
LIME1-206ENST00000487026 MZT1Q08AG7 82 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 C16orf87Q6PH81 154 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 PRSS45Q7RTY3 260 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 TMEM179BQ7Z7N9 219 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 RNF133Q8WVZ7 376 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 LRGUKQ96M69 825 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 TBX15Q96SF7 602 aa20.35■□□□□ 0.85
LIME1-206ENST00000487026 NDUFA2O43678 99 aa20.34■□□□□ 0.85
LIME1-206ENST00000487026 TOX4O94842 621 aa20.34■□□□□ 0.85
LIME1-206ENST00000487026 GRK5P34947 590 aa20.34■□□□□ 0.85
LIME1-206ENST00000487026 FGFRL1Q8N441 504 aa20.34■□□□□ 0.85
LIME1-206ENST00000487026 TOR3AQ9H497 397 aa20.34■□□□□ 0.85
LIME1-206ENST00000487026 MARCH7Q9H992 704 aa20.34■□□□□ 0.85
LIME1-206ENST00000487026 TRIM36Q9NQ86 728 aa20.34■□□□□ 0.85
LIME1-206ENST00000487026 CENPVL3A0A0U1RRI6 287 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 DVL1O14640 695 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 GLCEO94923 617 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 MMP9P14780 707 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 GSK3AP49840 483 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 CSNK2BP67870 215 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 IL13RA1P78552 427 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 KLHL12Q53G59 568 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 BTN2A1Q7KYR7 527 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 TIGD4Q8IY51 512 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 ADGRG5Q8IZF4 528 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 CCDC197Q8NCU1 140 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 OR1M1Q8NGA1 313 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 LRRC29Q8WV35 223 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 ASB9Q96DX5 294 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 SEH1LQ96EE3 360 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 PRDM13Q9H4Q3 707 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 TAS2R1Q9NYW7 299 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 PRPF19Q9UMS4 504 aaKnown RBP20.33■□□□□ 0.85
LIME1-206ENST00000487026 RHBDD3Q9Y3P4 386 aa20.33■□□□□ 0.85
LIME1-206ENST00000487026 hCG_38984A0A1B0GV85 526 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 A0A1B0GW55 424 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 P2RY10O00398 339 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 ACOT8O14734 319 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 LIPFP07098 398 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 H2BFMP0C1H6 154 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 DUX4L2P0CJ85 424 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 DUX4L3P0CJ86 424 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 DUX4L4P0CJ87 422 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 DUX4L5P0CJ88 424 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 DUX4L6P0CJ89 424 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 DUX4L7P0CJ90 424 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 MDKP21741 143 aaPredicted RBP20.32■□□□□ 0.84
LIME1-206ENST00000487026 OPRL1P41146 370 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 ARF6P62330 175 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 GINS1Q14691 196 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 TEX36Q5VZQ5 186 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 PLBD1Q6P4A8 553 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 DUX4L9Q6RFH8 374 aaPredicted RBP20.32■□□□□ 0.84
LIME1-206ENST00000487026 SHFQ7M4L6 423 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 PNLDC1Q8NA58 520 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms