RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 FKBP2P26885 142 aaKnown RBP11.76□□□□□ -0.53
HMGN1-216ENST00000486741 OR3A4PP47883 348 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 TGFBR3Q03167 851 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 ELFN2Q5R3F8 820 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 OR51F2Q8NH61 342 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 OR2V1Q8NHB1 315 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 REEP6Q96HR9 211 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 TAAR9Q96RI9 348 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 SLCO5A1Q9H2Y9 848 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 TMEM9BQ9NQ34 198 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 MRPL22Q9NWU5 206 aaKnown RBP11.76□□□□□ -0.53
HMGN1-216ENST00000486741 LUZP4Q9P127 313 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 MTFP1Q9UDX5 166 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 SLC23A1Q9UHI7 598 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 MPDZO75970 2070 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 DENND4CQ5VZ89 1909 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 UPK3AO75631 287 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 DXOO77932 396 aaKnown RBP11.76□□□□□ -0.53
HMGN1-216ENST00000486741 PVALBP20472 110 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-216ENST00000486741 P2RX3P56373 397 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 TAGLNQ01995 201 aaKnown RBP11.76□□□□□ -0.53
HMGN1-216ENST00000486741 RSPO4Q2I0M5 234 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-216ENST00000486741 APCDD1LQ8NCL9 501 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 OR2AK2Q8NG84 335 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 OR9K2Q8NGE7 335 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 OR1J2Q8NGS2 313 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 SPSB2Q99619 263 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 OBP2BQ9NPH6 170 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 PILRBQ9UKJ0 227 aa11.76□□□□□ -0.53
HMGN1-216ENST00000486741 RGS11O94810 467 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 PMS2P2O95744 297 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 PET100P0DJ07 73 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 S100A11P31949 105 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 RBP2P50120 134 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 AKR1C2P52895 323 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 GNMTQ14749 295 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 OR1C1Q15619 314 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 ESCO2Q56NI9 601 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 CLVS2Q5SYC1 327 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 SPATA46Q5T0L3 261 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 TMPRSS7Q7RTY8 843 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 LRRTM1Q86UE6 522 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 TMEM185AQ8NFB2 350 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 OR8B12Q8NGG6 310 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 NANOS1Q8WY41 292 aaKnown RBP11.75□□□□□ -0.53
HMGN1-216ENST00000486741 NPAS1Q99742 590 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 SYT3Q9BQG1 590 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 TIMM10BQ9Y5J6 103 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 PRR19A6NJB7 356 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 MT-CO3P00414 261 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF32P17041 273 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 TAS2R31P59538 309 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 SIGLEC14Q08ET2 396 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 PLPPR5Q32ZL2 321 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 OR10R2Q8NGX6 335 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 FOXB1Q99853 325 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 VRK1Q99986 396 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-216ENST00000486741 NICN1Q9BSH3 213 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 RPA2P15927 270 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 IDH3GP51553 393 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-216ENST00000486741 LUMP51884 338 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-216ENST00000486741 SLC10A1Q14973 349 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 TSC22D1Q15714 1073 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 PAQR8Q8TEZ7 354 aa11.75□□□□□ -0.53
HMGN1-216ENST00000486741 WDR89Q96FK6 387 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-216ENST00000486741 HSPB2A8KAH6 182 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 LYPD3O95274 346 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 NRASP01111 189 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 HLA-HP01893 362 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 ARHGDIBP52566 201 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 TRA2AQ13595 282 aaKnown RBP eCLIP11.74□□□□□ -0.538e-24■■□□□ 11.7
HMGN1-216ENST00000486741 HSPB2Q16082 182 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 LTC4SQ16873 150 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 GCNT2Q8N0V5 402 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF680Q8NEM1 530 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 OR4D6Q8NGJ1 314 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 NINJ1Q92982 152 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 ARHGAP5-AS1Q96IT6 56 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 PCDHGA9Q9Y5G4 932 aaKnown RBP11.74□□□□□ -0.53
HMGN1-216ENST00000486741 A0A087WZY1 265 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 A0A1B0GUH1 482 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 NXPH3O95157 252 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF205O95201 554 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 C19orf57Q0VDD7 668 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 GGTLC2Q14390 218 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 SLC25A26Q70HW3 274 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 TCTE3Q8IZS6 198 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 RELL2Q8NC24 303 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-216ENST00000486741 ST8SIA4Q92187 359 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 ADAT3Q96EY9 351 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-216ENST00000486741 NELFAQ9H3P2 528 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 MS4A18H0YCH9 400 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 HS3ST1O14792 307 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 FAM157BP0CG42 384 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 ADRA2CP18825 462 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 TAS2R46P59540 309 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 CYCSP99999 105 aaKnown RBP11.74□□□□□ -0.53
HMGN1-216ENST00000486741 KISS1Q15726 138 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 MS4A18Q3C1V0 323 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 MUC20Q8N307 709 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms