RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 NEIL1Q96FI4 390 aaPredicted RBP15.35■□□□□ 0.05
CLDN11-206ENST00000486429 TMEM246Q9BRR3 403 aa15.35■□□□□ 0.05
CLDN11-206ENST00000486429 YIPF3Q9GZM5 350 aa15.35■□□□□ 0.05
CLDN11-206ENST00000486429 NIPAL2Q9H841 368 aa15.35■□□□□ 0.05
CLDN11-206ENST00000486429 TMEM165Q9HC07 324 aa15.35■□□□□ 0.05
CLDN11-206ENST00000486429 C14orf119Q9NWQ9 140 aa15.35■□□□□ 0.05
CLDN11-206ENST00000486429 MIOXQ9UGB7 285 aa15.35■□□□□ 0.05
CLDN11-206ENST00000486429 CCDC182A6NF36 153 aa15.34■□□□□ 0.05
CLDN11-206ENST00000486429 A6NLC8 198 aa15.34■□□□□ 0.05
CLDN11-206ENST00000486429 MRPL3P09001 348 aaKnown RBP15.34■□□□□ 0.05
CLDN11-206ENST00000486429 ADRA2CP18825 462 aa15.34■□□□□ 0.05
CLDN11-206ENST00000486429 ASRGL1Q7L266 308 aa15.34■□□□□ 0.05
CLDN11-206ENST00000486429 NLRC3Q7RTR2 1065 aa15.34■□□□□ 0.05
CLDN11-206ENST00000486429 FTMTQ8N4E7 242 aa15.34■□□□□ 0.05
CLDN11-206ENST00000486429 PLPP7Q8NBV4 271 aa15.34■□□□□ 0.05
CLDN11-206ENST00000486429 OR8B3Q8NGG8 313 aa15.34■□□□□ 0.05
CLDN11-206ENST00000486429 OR8B2Q96RD0 313 aa15.34■□□□□ 0.05
CLDN11-206ENST00000486429 CNN2Q99439 309 aaKnown RBP15.34■□□□□ 0.05
CLDN11-206ENST00000486429 SSBP3Q9BWW4 388 aaPredicted RBP15.34■□□□□ 0.05
CLDN11-206ENST00000486429 RNF7Q9UBF6 113 aa15.34■□□□□ 0.05
CLDN11-206ENST00000486429 POLR3KQ9Y2Y1 108 aaPredicted RBP15.34■□□□□ 0.05
CLDN11-206ENST00000486429 LRP12Q9Y561 859 aa15.34■□□□□ 0.05
CLDN11-206ENST00000486429 WNK2Q9Y3S1 2297 aa15.33■□□□□ 0.05
CLDN11-206ENST00000486429 ZAR1LA6NP61 321 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 M0R129 80 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 WNT2P09544 360 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 GNALP38405 381 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 GSK3AP49840 483 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 GNB2P62879 340 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 SNCBQ16143 134 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 C12orf73Q69YU5 71 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 KCTD18Q6PI47 426 aaPredicted RBP15.33■□□□□ 0.04
CLDN11-206ENST00000486429 DCDC5Q6ZRR9 648 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 CCDC121Q6ZUS5 278 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 TCEANCQ8N8B7 351 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 DEFB108BQ8NET1 73 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 CSNK2A3Q8NEV1 391 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 NANPQ8TBE9 248 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 CENPNQ96H22 339 aaPredicted RBP15.33■□□□□ 0.04
CLDN11-206ENST00000486429 TEAD3Q99594 435 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 CIB1Q99828 191 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 C19orf24Q9BVV8 132 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 PAPOLGQ9BWT3 736 aaKnown RBP15.33■□□□□ 0.04
CLDN11-206ENST00000486429 SEMA6AQ9H2E6 1030 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 MMP26Q9NRE1 261 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 C1orf123Q9NWV4 160 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 ZNF319Q9P2F9 582 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 TMEM14AQ9Y6G1 99 aa15.33■□□□□ 0.04
CLDN11-206ENST00000486429 GRPP07492 148 aa15.32■□□□□ 0.04
CLDN11-206ENST00000486429 ZNF12P17014 697 aa15.32■□□□□ 0.04
CLDN11-206ENST00000486429 EPHA2P29317 976 aa15.32■□□□□ 0.04
CLDN11-206ENST00000486429 OR8B8Q15620 311 aa15.32■□□□□ 0.04
CLDN11-206ENST00000486429 NXNL2Q5VZ03 156 aa15.32■□□□□ 0.04
CLDN11-206ENST00000486429 BOLLQ8N9W6 283 aaKnown RBP15.32■□□□□ 0.04
CLDN11-206ENST00000486429 C19orf18Q8NEA5 215 aa15.32■□□□□ 0.04
CLDN11-206ENST00000486429 OR8B12Q8NGG6 310 aa15.32■□□□□ 0.04
CLDN11-206ENST00000486429 TMEM163Q8TC26 289 aa15.32■□□□□ 0.04
CLDN11-206ENST00000486429 ZNF418Q8TF45 676 aaPredicted RBP15.32■□□□□ 0.04
CLDN11-206ENST00000486429 MRI1Q9BV20 369 aa15.32■□□□□ 0.04
CLDN11-206ENST00000486429 OPN4Q9UHM6 478 aa15.32■□□□□ 0.04
CLDN11-206ENST00000486429 OAZ3Q9UMX2 235 aa15.32■□□□□ 0.04
CLDN11-206ENST00000486429 A0A0A6YYJ9 748 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 hCG_1807616A0A1W2PRN6 198 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 SLC22A31A6NKX4 558 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 TRAPPC2LH3BP13 241 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 LGALS8O00214 317 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 CD80P33681 288 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 PITPNBP48739 271 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 HCCSP53701 268 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 ZNF154Q13106 437 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 KCNJ8Q15842 424 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 ARMCX4Q5H9R4 360 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 DEGS2Q6QHC5 323 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 GID4Q8IVV7 300 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 PYDC1Q8WXC3 89 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 ASB17Q8WXJ9 295 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 OR8B4Q96RC9 309 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 MROQ9BYG7 248 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 TTTY10Q9BZA0 68 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 TRIM36Q9NQ86 728 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 H2AFY2Q9P0M6 372 aaPredicted RBP15.31■□□□□ 0.04
CLDN11-206ENST00000486429 ZNF391Q9UJN7 358 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 INSIG2Q9Y5U4 225 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 AUP1Q9Y679 476 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 ARHGAP32A7KAX9 2087 aa15.31■□□□□ 0.04
CLDN11-206ENST00000486429 SAC3D1A6NKF1 404 aa15.3■□□□□ 0.04
CLDN11-206ENST00000486429 ANXA2P2A6NMY6 339 aa15.3■□□□□ 0.04
CLDN11-206ENST00000486429 FSHBP01225 129 aa15.3■□□□□ 0.04
CLDN11-206ENST00000486429 HOXA4Q00056 320 aaPredicted RBP15.3■□□□□ 0.04
CLDN11-206ENST00000486429 AADACL4Q5VUY2 407 aa15.3■□□□□ 0.04
CLDN11-206ENST00000486429 ZNF826PQ6ZT77 177 aa15.3■□□□□ 0.04
CLDN11-206ENST00000486429 MEPCEQ7L2J0 689 aaKnown RBP15.3■□□□□ 0.04
CLDN11-206ENST00000486429 BCDIN3DQ7Z5W3 292 aaKnown RBP15.3■□□□□ 0.04
CLDN11-206ENST00000486429 IL4I1Q96RQ9 567 aa15.3■□□□□ 0.04
CLDN11-206ENST00000486429 GABARAPL3Q9BY60 117 aa15.3■□□□□ 0.04
CLDN11-206ENST00000486429 RIBC2Q9H4K1 309 aa15.3■□□□□ 0.04
CLDN11-206ENST00000486429 CLN8Q9UBY8 286 aa15.3■□□□□ 0.04
CLDN11-206ENST00000486429 IKZF2Q9UKS7 526 aa15.3■□□□□ 0.04
CLDN11-206ENST00000486429 COPS3Q9UNS2 423 aa15.3■□□□□ 0.04
CLDN11-206ENST00000486429 RHBDD3Q9Y3P4 386 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms