RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 GABRA1P14867 456 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 COL8A1P27658 744 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 HTR2CP28335 458 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 OR3A2P47893 321 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 INPP1P49441 399 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 SPOCK1Q08629 439 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 ASAH1Q13510 395 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 SF3B4Q15427 424 aaKnown RBP eCLIP12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 GFOD2Q3B7J2 385 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 HACD4Q5VWC8 232 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 FBXW9Q5XUX1 488 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 ZNF529Q6P280 563 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 Q6ZSR3 168 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 DPPA2Q7Z7J5 298 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 NAA40Q86UY6 237 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 CMTM4Q8IZR5 234 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 RPRMLQ8N4K4 120 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 OR14K1Q8NGZ2 314 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 AKR7LQ8NHP1 331 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 SYNPRQ8TBG9 265 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 SLC7A6Q92536 515 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 RND1Q92730 232 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 C10orf35Q96D05 121 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 SLC25A38Q96DW6 304 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 FAM71F1Q96KD3 344 aaPredicted RBP12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 C12orf49Q9H741 205 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 PLEKHA1Q9HB21 404 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 ZNF391Q9UJN7 358 aa12.71□□□□□ -0.38
POLR2J3-204ENST00000486319 PRSS44E7EML9 344 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 MAGEB3O15480 346 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 DHRS3O75911 302 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 TPPPO94811 219 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 PATE4P0C8F1 98 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 MPGP29372 298 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 MMP15P51511 669 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 PABPC1L2AQ5JQF8 200 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 C1orf100Q5SVJ3 147 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 OR2A2Q6IF42 318 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 JAGN1Q8N5M9 183 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 OR51A2Q8NGJ7 313 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 FGFBP3Q8TAT2 258 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 CA5BP1Q8WTZ4 195 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 C15orf40Q8WUR7 153 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 WNT2BQ93097 391 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 HAVCR1Q96D42 359 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 SORCS2Q96PQ0 1159 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 RHBDL2Q9NX52 303 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 PRSS50Q9UI38 385 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 KLF2Q9Y5W3 355 aaPredicted RBP12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 V9GYS6 101 aa12.7□□□□□ -0.38
POLR2J3-204ENST00000486319 LOC100289279A0A1B0GTE1 492 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 A6NIN4 97 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 CTDSPLO15194 276 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 SULT1B1O43704 296 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 COX5BP10606 129 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 PTGER4P35408 488 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 ARR3P36575 388 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 POU3F4P49335 361 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 TAB1Q15750 504 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 GLYATL3Q5SZD4 288 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 C1orf185Q5T7R7 199 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 C9orf135Q5VTT2 229 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 RTL6Q6ICC9 239 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 FAM214BQ7L5A3 538 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 CDH26Q8IXH8 852 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 OR51D1Q8NGF3 324 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 RFT1Q96AA3 541 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 FAM3DQ96BQ1 224 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 LYZL4Q96KX0 146 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 ABHD1Q96SE0 405 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 UQCC2Q9BRT2 126 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 THAP7Q9BT49 309 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 ZNF224Q9NZL3 707 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 FAM215AQ9Y5M1 114 aa12.69□□□□□ -0.38
POLR2J3-204ENST00000486319 A0A096LPE4 126 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 A0A1W2PPZ6 126 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 DHRS7CA6NNS2 312 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 CLDN14O95500 239 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 LCATP04180 440 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 ARSBP15848 533 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 THBS4P35443 961 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 MNDAP41218 407 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 FOXG1P55316 489 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 CDSNQ15517 529 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 C2orf76Q3KRA6 126 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 SFRP5Q5T4F7 317 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 SP5Q6BEB4 398 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 TMEM53Q6P2H8 277 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 ANKRD16Q6P6B7 361 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 GDPD3Q7L5L3 318 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 LYPD6Q86Y78 171 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 DTX3Q8N9I9 347 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 OR1K1Q8NGR3 316 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 OR13C9Q8NGT0 318 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 SLC25A28Q96A46 364 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 SOX7Q9BT81 388 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 SLC22A4Q9H015 551 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 RGCCQ9H4X1 137 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 METTL17Q9H7H0 456 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 MRPS7Q9Y2R9 242 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms