RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 SOX7Q9BT81 388 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 YTHDF1Q9BYJ9 559 aaKnown RBP16.97■□□□□ 0.31
COL6A2-208ENST00000485591 NKIRAS2Q9NYR9 191 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 ERGIC3Q9Y282 383 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 CSMD2Q7Z408 3487 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 SETXQ7Z333 2677 aaKnown RBP16.96■□□□□ 0.31
COL6A2-208ENST00000485591 USF3Q68DE3 2245 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 A0A1B0GTI1 187 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 E9PI62 339 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 P2RY10O00398 339 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 NDUFS7O75251 213 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 IGHV1-46P01743 117 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 IGHV4-39P01824 125 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 ATP6V1B1P15313 513 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 WNT4P56705 351 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 IRF3Q14653 427 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 CCDC58Q4VC31 144 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 Q6ZSR3 168 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 PRSS48Q7RTY5 328 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 KLBQ86Z14 1044 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 NANOGP1Q8N7R0 232 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 CSNK2A3Q8NEV1 391 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 OR13G1Q8NGZ3 307 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 NEU4Q8WWR8 484 aaPredicted RBP16.96■□□□□ 0.31
COL6A2-208ENST00000485591 FOXC2Q99958 501 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 MND1Q9BWT6 205 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 BARX1Q9HBU1 254 aaPredicted RBP16.96■□□□□ 0.31
COL6A2-208ENST00000485591 TRIM36Q9NQ86 728 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 BABAM2Q9NXR7 383 aa16.96■□□□□ 0.31
COL6A2-208ENST00000485591 MRPL15Q9P015 296 aaKnown RBP16.96■□□□□ 0.31
COL6A2-208ENST00000485591 TANC2Q9HCD6 1990 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 OR4C45A6NMZ5 311 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 SPRY3O43610 288 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 MTRF1O75570 445 aaKnown RBP16.95■□□□□ 0.3
COL6A2-208ENST00000485591 DHRS3O75911 302 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 ISG15P05161 165 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 CD55P08174 381 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 ACKR3P25106 362 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 MAP2K3P46734 347 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 EFNA4P52798 201 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 FAM209AQ5JX71 171 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 DOK3Q7L591 496 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 FTMTQ8N4E7 242 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 RPS4Y2Q8TD47 263 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 GATAD2BQ8WXI9 593 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 FAM71F1Q96KD3 344 aaPredicted RBP16.95■□□□□ 0.3
COL6A2-208ENST00000485591 SLC22A4Q9H015 551 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 TMEM100Q9NV29 134 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 NAV2Q8IVL1 2488 aa16.95■□□□□ 0.3
COL6A2-208ENST00000485591 A0A1B0GVI7 797 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 LOC107986453A0A1B0GWG9 222 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 DHRS7CA6NNS2 312 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 MLNRO43193 412 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 LALBAP00709 142 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 F12P00748 615 aaPredicted RBP16.94■□□□□ 0.3
COL6A2-208ENST00000485591 MT-ND2P03891 347 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 EEF1B2P24534 225 aaKnown RBP16.94■□□□□ 0.3
COL6A2-208ENST00000485591 MAGEB1P43366 347 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 GTF2A1P52655 376 aaPredicted RBP16.94■□□□□ 0.3
COL6A2-208ENST00000485591 CDK5R1Q15078 307 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 ODF4Q2M2E3 257 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 TMEM244Q5VVB8 128 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 XAF1Q6GPH4 301 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 RPL22L1Q6P5R6 122 aaKnown RBP16.94■□□□□ 0.3
COL6A2-208ENST00000485591 CCDC54Q8NEL0 328 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 SEMA6DQ8NFY4 1073 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 OR2Z1Q8NG97 314 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 ELMOD3Q96FG2 381 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 CXXC4Q9H2H0 198 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 NOP16Q9Y3C1 178 aaKnown RBP16.94■□□□□ 0.3
COL6A2-208ENST00000485591 V9GYS6 101 aa16.94■□□□□ 0.3
COL6A2-208ENST00000485591 TRBV2A0A0J9YWF9 115 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 TMEM212A6NML5 194 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 ANKRD30BLA7E2S9 258 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 SYT7O43581 403 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 MRPS14O60783 128 aaKnown RBP16.93■□□□□ 0.3
COL6A2-208ENST00000485591 NCR1O76036 304 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 TAS2R43P59537 309 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 TSTQ16762 297 aaKnown RBP16.93■□□□□ 0.3
COL6A2-208ENST00000485591 ZBTB37Q5TC79 503 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 KRT74Q7RTS7 529 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 OR14K1Q8NGZ2 314 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 CCDC90BQ9GZT6 254 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 LRCH1Q9Y2L9 728 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 LSM2Q9Y333 95 aaKnown RBP16.93■□□□□ 0.3
COL6A2-208ENST00000485591 ARID1AO14497 2285 aa16.93■□□□□ 0.3
COL6A2-208ENST00000485591 ZNF816-ZNF321PA0A0X1KG74 233 aa16.92■□□□□ 0.3
COL6A2-208ENST00000485591 OGG1O15527 345 aa16.92■□□□□ 0.3
COL6A2-208ENST00000485591 GMDSO60547 372 aa16.92■□□□□ 0.3
COL6A2-208ENST00000485591 ZFPL1O95159 310 aa16.92■□□□□ 0.3
COL6A2-208ENST00000485591 CST4P01036 141 aa16.92■□□□□ 0.3
COL6A2-208ENST00000485591 RPSAP08865 295 aaKnown RBP16.92■□□□□ 0.3
COL6A2-208ENST00000485591 ZNF12P17014 697 aa16.92■□□□□ 0.3
COL6A2-208ENST00000485591 ACHEP22303 614 aa16.92■□□□□ 0.3
COL6A2-208ENST00000485591 CA6P23280 308 aa16.92■□□□□ 0.3
COL6A2-208ENST00000485591 TNFSF4P23510 183 aa16.92■□□□□ 0.3
COL6A2-208ENST00000485591 ART1P52961 327 aa16.92■□□□□ 0.3
COL6A2-208ENST00000485591 CCL8P80075 99 aa16.92■□□□□ 0.3
COL6A2-208ENST00000485591 TNFAIP6P98066 277 aaPredicted RBP16.92■□□□□ 0.3
COL6A2-208ENST00000485591 RIPPLY1Q0D2K3 151 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms