RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 FAM3DQ96BQ1 224 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 ZNF488Q96MN9 340 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 RANBP9Q96S59 729 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 EBF4Q9BQW3 602 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 SULT4A1Q9BR01 284 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 FGFBP2Q9BYJ0 223 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 BARHL1Q9BZE3 327 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 OR51B5Q9H339 312 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 CENPHQ9H3R5 247 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 ZNF556Q9HAH1 456 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 SLC40A1Q9NP59 571 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 EXOSC4Q9NPD3 245 aaKnown RBP3.43□□□□□ -1.86
PTCD3-214ENST00000483925 FBXO8Q9NRD0 319 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 AIG1Q9NVV5 245 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 IL17CQ9P0M4 197 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 ZNF629Q9UEG4 869 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-214ENST00000483925 SLC22A13Q9Y226 551 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 MTCH2Q9Y6C9 303 aa3.43□□□□□ -1.86
PTCD3-214ENST00000483925 A0A087X002 238 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 ZNF233A6NK53 670 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 H3BNH8 94 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 SOCS3O14543 225 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 SSNA1O43805 119 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 CTNSO60931 367 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 ZNF780AO75290 641 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-214ENST00000483925 UGT2B11O75310 529 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 RAB3DO95716 219 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 RLN2P04090 185 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 THRAP10827 490 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 RCC1P18754 421 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-214ENST00000483925 HTR1DP28221 377 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 AP2S1P53680 142 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-214ENST00000483925 AQP5P55064 265 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 RPS21P63220 83 aaKnown RBP3.42□□□□□ -1.86
PTCD3-214ENST00000483925 RPL36AP83881 106 aaKnown RBP3.42□□□□□ -1.86
PTCD3-214ENST00000483925 FZD2Q14332 565 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 ZSCAN26Q16670 478 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 PRR30Q53SZ7 412 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-214ENST00000483925 MED27Q6P2C8 311 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 TEX43Q6ZNM6 134 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 OR8K1Q8NGG5 319 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 OR10J6PQ8NGY7 276 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 OR2G3Q8NGZ4 309 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 PHOSPHO2Q8TCD6 241 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 PTH2Q96A98 100 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 ZNF501Q96CX3 271 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-214ENST00000483925 ZMYND19Q96E35 227 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-214ENST00000483925 FCRL1Q96LA6 429 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 CCDC42Q96M95 316 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 RNF145Q96MT1 663 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 SMIM14Q96QK8 99 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 ARV1Q9H2C2 271 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 MFSD1Q9H3U5 465 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 HEXA-AS1Q9H8Q6 139 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 ZDHHC11Q9H8X9 412 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 SLC25A22Q9H936 323 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 UGT1A7Q9HAW7 530 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 UGT1A8Q9HAW9 530 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 FBXO6Q9NRD1 293 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-214ENST00000483925 CLCF1Q9UBD9 225 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 GUCA1BQ9UMX6 200 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 C9orf84Q5VXU9 1444 aa3.42□□□□□ -1.86
PTCD3-214ENST00000483925 TRAV8-4A0A0B4J246 113 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 OR2AT4A6NND4 320 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 H7C1H1 209 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 TCAPO15273 167 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 RDH16O75452 317 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 SEMA3DO95025 777 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 P01737 135 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 IGHV3-48P01763 117 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 EIF4EP06730 217 aaKnown RBP3.41□□□□□ -1.86
PTCD3-214ENST00000483925 RPS17P08708 135 aaKnown RBP3.41□□□□□ -1.86
PTCD3-214ENST00000483925 CD3GP09693 182 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 C8orf88P0DMB2 117 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 ERGP11308 486 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 COX7A1P24310 79 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 HSD11B1P28845 292 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 DLX6P56179 175 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 ARF6P62330 175 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 SARNPP82979 210 aaKnown RBP3.41□□□□□ -1.86
PTCD3-214ENST00000483925 MGAT3Q09327 533 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 MLLT11Q13015 90 aaPredicted RBP3.41□□□□□ -1.86
PTCD3-214ENST00000483925 ZNF266Q14584 549 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 TOMM34Q15785 309 aaPredicted RBP3.41□□□□□ -1.86
PTCD3-214ENST00000483925 CEACAM21Q3KPI0 293 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 LCN12Q6JVE5 192 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 BAIAP2L2Q6UXY1 529 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 USP50Q70EL3 339 aaPredicted RBP3.41□□□□□ -1.86
PTCD3-214ENST00000483925 NOTCH2NLQ7Z3S9 236 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 FAM220AQ7Z4H9 259 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 C10orf107Q8IVU9 208 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 C10orf67Q8IYJ2 551 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 HS3ST5Q8IZT8 346 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 STPG2Q8N412 459 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 ZFP41Q8N8Y5 198 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 OR2AE1Q8NHA4 323 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 PIGXQ8TBF5 258 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 NT5CQ8TCD5 201 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 SMIM19Q96E16 107 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 SEH1LQ96EE3 360 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms