RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 FAM46BQ96A09 425 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 APH1AQ96BI3 265 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 C20orf85Q9H1P6 137 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 RANGRFQ9HD47 186 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-225ENST00000483495 MYEF2Q9P2K5 600 aaKnown RBP11.55□□□□□ -0.56
CPNE1-225ENST00000483495 ZNF107Q9UII5 783 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-225ENST00000483495 MRPS28Q9Y2Q9 187 aaKnown RBP11.55□□□□□ -0.56
CPNE1-225ENST00000483495 ZNF175Q9Y473 711 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 TRAV17A0A0B4J275 112 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 WIPF3A6NGB9 483 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 A8MV72 311 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-225ENST00000483495 PROB1E7EW31 1015 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 MELTFP08582 738 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 HCKP08631 526 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 UBBP0CG47 229 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 FAHP16930 419 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 FAUP35544 74 aaKnown RBP11.55□□□□□ -0.56
CPNE1-225ENST00000483495 ACTBP60709 375 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 ACTG1P63261 375 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 UBE2V2Q15819 145 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 KCNJ8Q15842 424 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 ZNF260Q3ZCT1 412 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 SFRP4Q6FHJ7 346 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-225ENST00000483495 GLIPR1L1Q6UWM5 242 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 MCEMP1Q8IX19 187 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 SPACA5Q96QH8 159 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 RGCCQ9H4X1 137 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 NEK6Q9HC98 313 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 GHRLQ9UBU3 117 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 PIGLQ9Y2B2 252 aa11.55□□□□□ -0.56
CPNE1-225ENST00000483495 PEX14O75381 377 aa11.54□□□□□ -0.56
CPNE1-225ENST00000483495 OR3A4PP47883 348 aa11.54□□□□□ -0.56
CPNE1-225ENST00000483495 MECP2P51608 486 aaKnown RBP11.54□□□□□ -0.56
CPNE1-225ENST00000483495 PMP22Q01453 160 aa11.54□□□□□ -0.56
CPNE1-225ENST00000483495 PABPC1L2AQ5JQF8 200 aa11.54□□□□□ -0.56
CPNE1-225ENST00000483495 NUFIP2Q7Z417 695 aaKnown RBP11.54□□□□□ -0.56
CPNE1-225ENST00000483495 SEMA6DQ8NFY4 1073 aa11.54□□□□□ -0.56
CPNE1-225ENST00000483495 KCNG3Q8TAE7 436 aa11.54□□□□□ -0.56
CPNE1-225ENST00000483495 ITFG2Q969R8 447 aa11.54□□□□□ -0.56
CPNE1-225ENST00000483495 REEP6Q96HR9 211 aa11.54□□□□□ -0.56
CPNE1-225ENST00000483495 FYTTD1Q96QD9 318 aaKnown RBP11.54□□□□□ -0.56
CPNE1-225ENST00000483495 PRDM14Q9GZV8 571 aa11.54□□□□□ -0.56
CPNE1-225ENST00000483495 MCUBQ9NWR8 336 aa11.54□□□□□ -0.56
CPNE1-225ENST00000483495 ITGB1BP2Q9UKP3 347 aa11.54□□□□□ -0.56
CPNE1-225ENST00000483495 PRAF2O60831 178 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 NDUFB6O95139 128 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 TGM6O95932 706 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 LCATP04180 440 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 CHRM2P08172 466 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 AKAIN1P0CW23 69 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 COX5BP10606 129 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 NAT2P11245 290 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 ZNF24P17028 368 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 ACKR3P25106 362 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 CD83Q01151 205 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 KISS1Q15726 138 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 DEFB109BQ30KR1 87 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 ZFP69Q49AA0 526 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 COLCA1Q6ZS62 124 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 ZNF100Q8IYN0 542 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 TMEM229BQ8NBD8 167 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 ACBD4Q8NC06 268 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 CPEB3Q8NE35 698 aaKnown RBP11.53□□□□□ -0.56
CPNE1-225ENST00000483495 OR4C16Q8NGL9 310 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 GAL3ST1Q99999 423 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 C1QTNF5Q9BXJ0 243 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 LPAR5Q9H1C0 372 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 OR51J1Q9H342 316 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 B3GNT2Q9NY97 397 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 UPB1Q9UBR1 384 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 POU2F3Q9UKI9 436 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 KCNMB2Q9Y691 235 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 SLC22A20A6NK97 555 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 FCGR2AP12318 317 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 AGTR1P30556 359 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 PTGFRP43088 359 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 NKX2-5P52952 324 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-225ENST00000483495 FOXG1P55316 489 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-225ENST00000483495 RIPPLY1Q0D2K3 151 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 TNK1Q13470 666 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 FAM189A2Q15884 450 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 LINC00303Q3SY05 128 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 CD276Q5ZPR3 534 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 TMEM42Q69YG0 159 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 FAAP20Q6NZ36 180 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 ZNF101Q8IZC7 436 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 PNLDC1Q8NA58 520 aaKnown RBP11.53□□□□□ -0.56
CPNE1-225ENST00000483495 OR10R2Q8NGX6 335 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 OR2AE1Q8NHA4 323 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 GIMAP1Q8WWP7 306 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 SPSB4Q96A44 273 aa11.53□□□□□ -0.56
CPNE1-225ENST00000483495 TRAF4Q9BUZ4 470 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-225ENST00000483495 ZNF407Q9C0G0 2248 aa11.52□□□□□ -0.56
CPNE1-225ENST00000483495 hCG_38984A0A1B0GV85 526 aa11.52□□□□□ -0.57
CPNE1-225ENST00000483495 TMEM235A6NFC5 223 aa11.52□□□□□ -0.57
CPNE1-225ENST00000483495 ICMTO60725 284 aa11.52□□□□□ -0.57
CPNE1-225ENST00000483495 CDC14BO60729 498 aa11.52□□□□□ -0.57
CPNE1-225ENST00000483495 GTF2F2P13984 249 aa11.52□□□□□ -0.57
CPNE1-225ENST00000483495 TAS2R19P59542 299 aa11.52□□□□□ -0.57
CPNE1-225ENST00000483495 RSPO4Q2I0M5 234 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms