RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ENSAO43768 121 aaKnown RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 SLC16A7O60669 478 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 KHDRBS3O75525 346 aaKnown RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 NDUFA7O95182 113 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 IFNW1P05000 195 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 LIPFP07098 398 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 KDELR2P33947 212 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 RBMXP38159 391 aaKnown RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 NPY4RP50391 375 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 ERFP50548 548 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 RPL15P61313 204 aaKnown RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 FGF12P61328 243 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 SELENOWP63302 87 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 PRKCDQ05655 676 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 MAPRE2Q15555 327 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 KCNJ8Q15842 424 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 ZNF404Q494X3 552 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 COQ5Q5HYK3 327 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 BEND6Q5SZJ8 279 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 WDR25Q64LD2 544 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 GPR139Q6DWJ6 353 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 OR2T2Q6IF00 324 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 FIP1L1Q6UN15 594 aaKnown RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 FBXW12Q6X9E4 464 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 BRD3OSQ6XYD6 125 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 Q6YL49 198 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 ZNF730Q6ZMV8 503 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 DCDC5Q6ZRR9 648 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 CALHM3Q86XJ0 350 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 RNF113BQ8IZP6 322 aaKnown RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 OFCC1Q8IZS5 231 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 TMEM86BQ8N661 226 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 OR2T12Q8NG77 320 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 OR13C2Q8NGS9 318 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 OR11L1Q8NGX0 322 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 C10orf82Q8WW14 230 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 SSMEM1Q8WWF3 244 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 ACOT11Q8WXI4 607 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 SLC7A6Q92536 515 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 TAF15Q92804 592 aaKnown RBP eCLIP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 ERGIC1Q969X5 290 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 APOBEC3DQ96AK3 386 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 Q96M85 177 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 ZNF570Q96NI8 536 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 HCAR1Q9BXC0 346 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 PRDM13Q9H4Q3 707 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 RERGLQ9H628 205 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 MARCH7Q9H992 704 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 TMEM100Q9NV29 134 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 INTS9Q9NV88 658 aaKnown RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 GID8Q9NWU2 228 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 PTTG3PQ9NZH4 202 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 A4GNTQ9UNA3 340 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 NOP16Q9Y3C1 178 aaKnown RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 SOX21Q9Y651 276 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-207ENST00000483407 POMT1Q9Y6A1 747 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 TRRAPQ9Y4A5 3859 aa4.88□□□□□ -1.63
CSDE1-207ENST00000483407 IGHV3-64DA0A0J9YX35 117 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 ELOVL7A1L3X0 281 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FAM90A18PA6NE21 464 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FAM90A16PA6NEW6 464 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FAM90A9PA6NNJ1 464 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FAM90A5PA8MXJ8 464 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 IQCF6A8MYZ5 107 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FAM220BPB1ANY3 271 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 F5H5P2 479 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FXYD1O00168 92 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 P2RY10O00398 339 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 MRASO14807 208 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 RER1O15258 196 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 NDUFB2O95178 105 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FAM90A15PP0C7V4 464 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FAM90A14PP0C7W9 464 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 CTLA4P16410 223 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FPR3P25089 353 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 CRABP1P29762 137 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 GPR4P46093 362 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 YAP1P46937 504 aaKnown RBP4.87□□□□□ -1.63
CSDE1-207ENST00000483407 CENPAP49450 140 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 RAD23AP54725 363 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 TIRAPP58753 221 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 SRSF4Q08170 494 aaKnown RBP4.87□□□□□ -1.63
CSDE1-207ENST00000483407 KRR1Q13601 381 aaKnown RBP4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FHL1Q13642 323 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 ZBED5Q49AG3 693 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 CCDC92Q53HC0 331 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-207ENST00000483407 MESTQ5EB52 335 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FAM201AQ5SY85 155 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 DNM1P34Q6PK57 102 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 ZNF620Q6ZNG0 422 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 TMPRSS11FQ6ZWK6 438 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 MBOAT2Q6ZWT7 520 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 FAM122BQ7Z309 247 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 ADCK1Q86TW2 530 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 CYP4Z1Q86W10 505 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 CPOQ8IVL8 374 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 IZUMO1Q8IYV9 350 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 PNLDC1Q8NA58 520 aaKnown RBP4.87□□□□□ -1.63
CSDE1-207ENST00000483407 BHLHE23Q8NDY6 225 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 GJC3Q8NFK1 279 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms