RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 BPIFCQ8NFQ6 507 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 OR5D14Q8NGL3 314 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 RNF138Q8WVD3 245 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 CCDC74BQ96LY2 380 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 PHB2Q99623 299 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 WDR77Q9BQA1 342 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-220ENST00000482507 FAM117AQ9C073 453 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 SEC61A2Q9H9S3 476 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 FANCFQ9NPI8 374 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 TMEM9BQ9NQ34 198 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 B3GALT5Q9Y2C3 310 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 TRBV11-1A0A0K0K1C0 115 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 A0A1W2PNV4 684 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 C5orf63A6NC05 138 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 VSTM2BA6NLU5 285 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 DBX1A6NMT0 343 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 DNASE2O00115 360 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-220ENST00000482507 ETV2O00321 342 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-220ENST00000482507 RAD51DO75771 328 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 CNR1P21554 472 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 OR3A4PP47883 348 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 EMP2P54851 167 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 MICBQ29980 383 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 PLPPR5Q32ZL2 321 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 CARD17Q5XLA6 110 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 ROBO4Q8WZ75 1007 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 TGIF2Q9GZN2 237 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 BANF2Q9H503 90 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 GLS2Q9UI32 602 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 RPH3AQ9Y2J0 694 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-220ENST00000482507 A0A1W2PNR3 127 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 E9PLN8 166 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 GP1BAP07359 652 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 ZNF883P0CG24 379 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 PGA4P0DJD7 388 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 PGA3P0DJD8 388 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 SUMO3P55854 103 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-220ENST00000482507 GPR85P60893 370 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 GLIPR1L1Q6UWM5 242 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 UNQ6126/PRO20091Q6UXV3 157 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 HOGA1Q86XE5 327 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 OR8B12Q8NGG6 310 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 DNTTIP1Q9H147 329 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 TAS2R3Q9NYW6 316 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 PRR13Q9NZ81 148 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 KLRF1Q9NZS2 232 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 FBLN5Q9UBX5 448 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 MED12Q93074 2177 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 FAM74A7A6NL05 159 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 TOR1AO14656 332 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 RER1O15258 196 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 TRAF3IP2O43734 574 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-220ENST00000482507 DUS4LO95620 317 aaKnown RBP13.13□□□□□ -0.31
ATG4B-220ENST00000482507 DUSP3P51452 185 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-220ENST00000482507 TMEM50BP56557 158 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 FAM74A3Q4VXF1 159 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 RHBDD2Q6NTF9 364 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 ZNF101Q8IZC7 436 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 BHLHE23Q8NDY6 225 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 OR10G3Q8NGC4 313 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 OR4K15Q8NH41 348 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 ZNF768Q9H5H4 540 aaKnown RBP13.13□□□□□ -0.31
ATG4B-220ENST00000482507 OCIAD1Q9NX40 245 aa13.13□□□□□ -0.31
ATG4B-220ENST00000482507 IGLV3-12A0A075B6K2 115 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 MPIG6BO95866 241 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 HEXBP07686 556 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 SERPINF1P36955 418 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 ZNF121P58317 390 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-220ENST00000482507 SNTB1Q13884 538 aaKnown RBP13.12□□□□□ -0.31
ATG4B-220ENST00000482507 THEM4Q5T1C6 240 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 FAHD2BQ6P2I3 314 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-220ENST00000482507 ABHD12BQ7Z5M8 362 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-220ENST00000482507 TMEM185AQ8NFB2 350 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 OR1S2Q8NGQ3 325 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 NUBPLQ8TB37 319 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 TMEM230Q96A57 120 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 LRRC46Q96FV0 321 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 FAHD2AQ96GK7 314 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 OR6C1Q96RD1 312 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 PNRC2Q9NPJ4 139 aaKnown RBP13.12□□□□□ -0.31
ATG4B-220ENST00000482507 GPR84Q9NQS5 396 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 PPP4R1LQ9P1A2 415 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 ASH2LQ9UBL3 628 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 MRPS28Q9Y2Q9 187 aaKnown RBP13.12□□□□□ -0.31
ATG4B-220ENST00000482507 FREM2Q5SZK8 3169 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 GVINP1Q7Z2Y8 2422 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 C13orf42A0A1B0GVH6 325 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 F5H0A9 414 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-220ENST00000482507 CRHP06850 196 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 ICAM2P13598 275 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 ZNF20P17024 532 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 CLRN1P58418 232 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 PAN3Q58A45 887 aaKnown RBP13.12□□□□□ -0.31
ATG4B-220ENST00000482507 FAM69BQ5VUD6 431 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 UEVLDQ8IX04 471 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 NOXO1Q8NFA2 376 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 THAP6Q8TBB0 222 aa13.12□□□□□ -0.31
ATG4B-220ENST00000482507 RRNAD1Q96FB5 475 aaKnown RBP13.12□□□□□ -0.31
ATG4B-220ENST00000482507 FAM71F1Q96KD3 344 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-220ENST00000482507 RNF126Q9BV68 326 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms