RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 HTR1DP28221 377 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 SPAG1Q07617 926 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 PIP5KL1Q5T9C9 394 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 SLC25A34Q6PIV7 304 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 TMCO2Q7Z6W1 182 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-210ENST00000482158 ZNF547Q8IVP9 402 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 C19orf18Q8NEA5 215 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 ITFG1Q8TB96 612 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 GPX8Q8TED1 209 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 ZNF707Q96C28 371 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-210ENST00000482158 KCNS1Q96KK3 526 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 FAM210AQ96ND0 272 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 GPR21Q99679 349 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 TBL1YQ9BQ87 522 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 AGMATQ9BSE5 352 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 ULBP2Q9BZM5 246 aa3.05□□□□□ -1.92
SF3B1-210ENST00000482158 TAAR5O14804 337 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 XRCC2O43543 280 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 RAB5AP20339 215 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 GGT2P36268 569 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 ZNF33AQ06730 810 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 PPIDQ08752 370 aaKnown RBP3.04□□□□□ -1.92
SF3B1-210ENST00000482158 TEX30Q5JUR7 227 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 PLCXD3Q63HM9 321 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 RTL4Q6ZR62 310 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 CMTM8Q8IZV2 173 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 SPANXA2-OT1Q8N9U9 137 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 MNS1Q8NEH6 495 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 OR1J4Q8NGS1 313 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 OR13G1Q8NGZ3 307 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 GHSRQ92847 366 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 APH1AQ96BI3 265 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 NAA50Q9GZZ1 169 aaKnown RBP3.04□□□□□ -1.92
SF3B1-210ENST00000482158 IQCGQ9H095 443 aaKnown RBP3.04□□□□□ -1.92
SF3B1-210ENST00000482158 DEFB129Q9H1M3 183 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 ENOPH1Q9UHY7 261 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 ZNF257Q9Y2Q1 563 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 RHBDD3Q9Y3P4 386 aa3.04□□□□□ -1.92
SF3B1-210ENST00000482158 ADGRA3Q8IWK6 1321 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.03□□□□□ -1.92
SF3B1-210ENST00000482158 GOLGA6L7A0A1B0GV03 622 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 CASC3O15234 703 aaKnown RBP3.03□□□□□ -1.92
SF3B1-210ENST00000482158 EIF1BO60739 113 aaKnown RBP3.03□□□□□ -1.92
SF3B1-210ENST00000482158 PAHP00439 452 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 IL4P05112 153 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 IL1RNP18510 177 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 MYL9P24844 172 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 EIF1P41567 113 aaKnown RBP3.03□□□□□ -1.92
SF3B1-210ENST00000482158 MAGEA1P43355 309 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 GPR1P46091 355 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 RAB11AP62491 216 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 PIGHQ14442 188 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-210ENST00000482158 RAB11BQ15907 218 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 HIKESHIQ53FT3 197 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 DNLZQ5SXM8 178 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 LINC00336Q6ZUF6 198 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 UNC93AQ86WB7 457 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 MYOCDQ8IZQ8 938 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 INO80EQ8NBZ0 244 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-210ENST00000482158 OR5T1Q8NG75 326 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 RTN4IP1Q8WWV3 396 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-210ENST00000482158 RTBDNQ9BSG5 229 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-210ENST00000482158 ZNF717Q9BY31 904 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-210ENST00000482158 NCOR1P1Q9H4R4 102 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 RBFOX1Q9NWB1 397 aaKnown RBP3.03□□□□□ -1.92
SF3B1-210ENST00000482158 MCUBQ9NWR8 336 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 ZMAT5Q9UDW3 170 aaKnown RBP3.03□□□□□ -1.92
SF3B1-210ENST00000482158 CFAP45Q9UL16 551 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 PSME2Q9UL46 239 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 CBY1Q9Y3M2 126 aa3.03□□□□□ -1.92
SF3B1-210ENST00000482158 LINC00854A0A1B0GVQ3 168 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 PRLHRP49683 370 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 ATP6V0D1P61421 351 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 DNAJC3Q13217 504 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 SLC25A35Q3KQZ1 300 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 RWDD4Q6NW29 188 aaKnown RBP3.02□□□□□ -1.93
SF3B1-210ENST00000482158 ZNF101Q8IZC7 436 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 KIF2BQ8N4N8 673 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 OR9A2Q8NGT5 310 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 RXFP4Q8TDU9 374 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 NAT6Q93015 286 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 CSPG4P5Q96PW8 444 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 CDX2Q99626 313 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-210ENST00000482158 TOLLIPQ9H0E2 274 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 OR2AG1Q9H205 316 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 CRLF2Q9HC73 371 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 C21orf62Q9NYP8 219 aa3.02□□□□□ -1.93
SF3B1-210ENST00000482158 TICRRQ7Z2Z1 1910 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 A0A1B0GUH1 482 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 H0YC42 278 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 M0QX08 132 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 LGALS9O00182 355 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 NEMFO60524 1076 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 SLC19A2O60779 497 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 CTNSO60931 367 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 MPDU1O75352 247 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 CDRT1O95170 752 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 TGM6O95932 706 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms