RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 PARP8Q8N3A8 854 aa9.58□□□□□ -0.88
CCM2-213ENST00000480658 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.58□□□□□ -0.88
CCM2-213ENST00000480658 C3orf56Q8N813 242 aa9.58□□□□□ -0.88
CCM2-213ENST00000480658 ZNF511Q8NB15 262 aa9.58□□□□□ -0.88
CCM2-213ENST00000480658 OR56B2PQ8NGI1 322 aa9.58□□□□□ -0.88
CCM2-213ENST00000480658 OTOSQ8NHW6 89 aa9.58□□□□□ -0.88
CCM2-213ENST00000480658 CANT1Q8WVQ1 401 aa9.58□□□□□ -0.88
CCM2-213ENST00000480658 UPRTQ96BW1 309 aa9.58□□□□□ -0.88
CCM2-213ENST00000480658 TECTBQ96PL2 329 aa9.58□□□□□ -0.88
CCM2-213ENST00000480658 MNTQ99583 582 aa9.58□□□□□ -0.88
CCM2-213ENST00000480658 MICU1Q9BPX6 476 aa9.58□□□□□ -0.88
CCM2-213ENST00000480658 NUDT16L1Q9BRJ7 211 aaKnown RBP9.58□□□□□ -0.88
CCM2-213ENST00000480658 RTL8AQ9BWD3 113 aa9.58□□□□□ -0.88
CCM2-213ENST00000480658 DYSFO75923 2080 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 hCG_1807616A0A1W2PRN6 198 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 TRAPPC2LH3BP13 241 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 ZNF254O75437 659 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 ATP6V1B1P15313 513 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 PRTN3P24158 256 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 POU1F1P28069 291 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 DCTDP32321 178 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 OPRL1P41146 370 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 RPS27P42677 84 aaKnown RBP9.57□□□□□ -0.88
CCM2-213ENST00000480658 PSMA6P60900 246 aaKnown RBP9.57□□□□□ -0.88
CCM2-213ENST00000480658 RPS7P62081 194 aaKnown RBP9.57□□□□□ -0.88
CCM2-213ENST00000480658 ESRRGP62508 458 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 GINS1Q14691 196 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 WDR25Q64LD2 544 aaPredicted RBP9.57□□□□□ -0.88
CCM2-213ENST00000480658 SLC16A9Q7RTY1 509 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 TIGD4Q8IY51 512 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 OR2AE1Q8NHA4 323 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 SGMS2Q8NHU3 365 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 ASB17Q8WXJ9 295 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 DVL3Q92997 716 aaPredicted RBP9.57□□□□□ -0.88
CCM2-213ENST00000480658 PGAM5Q96HS1 289 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 CLPTM1LQ96KA5 538 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 ABHD6Q9BV23 337 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 PAPOLGQ9BWT3 736 aaKnown RBP9.57□□□□□ -0.88
CCM2-213ENST00000480658 OSBPL10Q9BXB5 764 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 MROQ9BYG7 248 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 DNTTIP1Q9H147 329 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 OR51V1Q9H2C8 321 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 MOB1AQ9H8S9 216 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 SLC25A19Q9HC21 320 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 MMP26Q9NRE1 261 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 PAPOLBQ9NRJ5 636 aaKnown RBP9.57□□□□□ -0.88
CCM2-213ENST00000480658 DCAF16Q9NXF7 216 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 VNN3Q9NY84 501 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 KAAG1Q9UBP8 84 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 LAMP5Q9UJQ1 280 aa9.57□□□□□ -0.88
CCM2-213ENST00000480658 hCG_38984A0A1B0GV85 526 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 TCRBV3S1A0A5B6 114 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 P2RY10O00398 339 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 FKBP6O75344 327 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 CFHR2P36980 270 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 ZNF121P58317 390 aaPredicted RBP9.56□□□□□ -0.88
CCM2-213ENST00000480658 RPL15P61313 204 aaKnown RBP9.56□□□□□ -0.88
CCM2-213ENST00000480658 SEC61A1P61619 476 aaKnown RBP9.56□□□□□ -0.88
CCM2-213ENST00000480658 UBA52P62987 128 aaKnown RBP9.56□□□□□ -0.88
CCM2-213ENST00000480658 FAM3AP98173 230 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 CDK5Q00535 292 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 PAX2Q02962 417 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 PPP1R8Q12972 351 aaKnown RBP9.56□□□□□ -0.88
CCM2-213ENST00000480658 PDCD1Q15116 288 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 ZNF829Q3KNS6 432 aaPredicted RBP9.56□□□□□ -0.88
CCM2-213ENST00000480658 ZBTB37Q5TC79 503 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 METTL11BQ5VVY1 283 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 TEX36Q5VZQ5 186 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 PLBD1Q6P4A8 553 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 NAA40Q86UY6 237 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 GALNT4Q8N4A0 578 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 OR10Z1Q8NGY1 313 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 HIST1H2AAQ96QV6 131 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 YIPF3Q9GZM5 350 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 NOX4Q9NPH5 578 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 UFSP2Q9NUQ7 469 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 C1orf123Q9NWV4 160 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 POMPQ9Y244 141 aa9.56□□□□□ -0.88
CCM2-213ENST00000480658 A0A0U1RQV5 110 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 SLC22A31A6NKX4 558 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 FAM183AA6NL82 134 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 ZNF879B4DU55 563 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 ADAM20O43506 726 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 MTRF1O75570 445 aaKnown RBP9.55□□□□□ -0.88
CCM2-213ENST00000480658 PLATP00750 562 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 CST4P01036 141 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 RNASE1P07998 156 aaKnown RBP9.55□□□□□ -0.88
CCM2-213ENST00000480658 CLUP10909 449 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 GSK3AP49840 483 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 BAMBIQ13145 260 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 TUSC1Q2TAM9 212 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 KLHL12Q53G59 568 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 PRAMEF6Q5VXH4 476 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 LYPD4Q6UWN0 246 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 FAM57BQ71RH2 274 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 KRT77Q7Z794 578 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 CMTM4Q8IZR5 234 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 TMEM86BQ8N661 226 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 FAM81AQ8TBF8 368 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 THEM6Q8WUY1 208 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms