RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 SDR9C7Q8NEX9 313 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 OR8G5Q8NG78 346 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 OR52E2Q8NGJ4 325 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 OR1J1Q8NGS3 322 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 OR4Q3Q8NH05 313 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 OTOSQ8NHW6 89 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 RFKQ969G6 155 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF799Q96GE5 643 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF582Q96NG8 517 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-213ENST00000480102 RAB3IPQ96QF0 476 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-213ENST00000480102 HCAR1Q9BXC0 346 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 OR2J1Q9GZK6 312 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 EGLN1Q9GZT9 426 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 EGLN3Q9H6Z9 239 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 MOB1AQ9H8S9 216 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 SAP30LQ9HAJ7 183 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 TRIM36Q9NQ86 728 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 AURKAIP1Q9NWT8 199 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-213ENST00000480102 PURGQ9UJV8 347 aaKnown RBP4.15□□□□□ -1.75
PTCD3-213ENST00000480102 U3KQV3 271 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 PCNX3Q9H6A9 2034 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 FREM3P0C091 2139 aa4.15□□□□□ -1.75
PTCD3-213ENST00000480102 ACANP16112 2415 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 CADP27708 2225 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 A0A1W2PPW3 197 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 UBE2QL1A1L167 161 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 TRIM64A6NGJ6 449 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 TRIM64BA6NI03 449 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 SNTNA6NMZ2 147 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 B4DSR2 109 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 PRR23D1E9PI22 279 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 H3BN98 237 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 H3BNX3 289 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 J3QLI3 93 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF593O00488 134 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 NDUFA2O43678 99 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 NDUFS7O75251 213 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 SULT1C4O75897 302 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 NGFP01138 241 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 IGLV3-1P01715 115 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 IGHV1-46P01743 117 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 LCKP06239 509 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 ACAA1P09110 424 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 PATE4P0C8F1 98 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 PRR23D2P0DMB1 279 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 PTNP21246 168 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 CD200P41217 278 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 SRP9P49458 86 aaKnown RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 DAPP51397 102 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 ALDH3A2P51648 485 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 RAD23AP54725 363 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 DVL1P1P54792 670 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 BPIFB3P59826 476 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 SNRPGP62308 76 aaKnown RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 MRPL28Q13084 256 aaKnown RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 SCGB2A2Q13296 93 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 GINS1Q14691 196 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 PTGES3Q15185 160 aaKnown RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 OR8B8Q15620 311 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 KCNJ8Q15842 424 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 HFEQ30201 348 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 ACSM5Q6NUN0 579 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 CLEC9AQ6UXN8 241 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 RFPL4BQ6ZWI9 263 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 USP51Q70EK9 711 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 PGAP1Q75T13 922 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 SLC16A9Q7RTY1 509 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM179BQ7Z7N9 219 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF679Q8IYX0 411 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 CMTM4Q8IZR5 234 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 MUC20Q8N307 709 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF525Q8N782 197 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 PACRGLQ8N7B6 248 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 CSNK2A3Q8NEV1 391 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 OR10S1Q8NGN2 331 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 AKR7LQ8NHP1 331 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 SLC25A40Q8TBP6 338 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM163Q8TC26 289 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 RAB1CQ92928 201 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 C12orf43Q96C57 262 aaKnown RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 C10orf35Q96D05 121 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 RAB39BQ96DA2 213 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 TIMD4Q96H15 378 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 TSSK2Q96PF2 358 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 INTS14Q96SY0 518 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 TEAD3Q99594 435 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 PITX2Q99697 317 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 ADI1Q9BV57 179 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 BPESC1Q9GZL8 116 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 WDR76Q9H967 626 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 SEBOXQ9HB31 216 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 MRPS18AQ9NVS2 196 aaKnown RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 TAAR3PQ9P1P4 343 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 WARS2Q9UGM6 360 aaKnown RBP4.14□□□□□ -1.75
PTCD3-213ENST00000480102 IL20RAQ9UHF4 553 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 V9GYQ6 96 aa4.14□□□□□ -1.75
PTCD3-213ENST00000480102 CSPG4Q6UVK1 2322 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 IGHV1-69-2A0A0G2JMI3 117 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 ZSCAN5BA6NJL1 495 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms