RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TAB1Q15750 504 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 GSG1Q2KHT4 349 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 TBRG1Q3YBR2 411 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 TMEM42Q69YG0 159 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 RAB12Q6IQ22 244 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 C17orf78Q8N4C9 275 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 CPEB3Q8NE35 698 aaKnown RBP9.58□□□□□ -0.88
VTI1A-204ENST00000480057 DUSP18Q8NEJ0 188 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 OR4D6Q8NGJ1 314 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 OR5M9Q8NGP3 310 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 FCAMRQ8WWV6 532 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 APOBEC3DQ96AK3 386 aaPredicted RBP9.58□□□□□ -0.88
VTI1A-204ENST00000480057 POM121L2Q96KW2 1035 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 C11orf54Q9H0W9 315 aaPredicted RBP9.58□□□□□ -0.88
VTI1A-204ENST00000480057 OBP2BQ9NPH6 170 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 CGGBP1Q9UFW8 167 aaPredicted RBP9.58□□□□□ -0.88
VTI1A-204ENST00000480057 PIGLQ9Y2B2 252 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 TP53TG5Q9Y2B4 290 aa9.58□□□□□ -0.88
VTI1A-204ENST00000480057 RBMX2Q9Y388 322 aaKnown RBP9.58□□□□□ -0.88
VTI1A-204ENST00000480057 hCG_2014768A0A024R1R8 64 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 A0A096LPE4 126 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 A0A1W2PPZ6 126 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 C5orf63A6NC05 138 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 METTL21EPA6NDL7 271 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 CENPXA8MT69 81 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 K7EM74 188 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 EEF1E1O43324 174 aaKnown RBP9.57□□□□□ -0.88
VTI1A-204ENST00000480057 ICMTO60725 284 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 PFDN1O60925 122 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 HCKP08631 526 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 GSTT2BP0CG30 244 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 CD79AP11912 226 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 EDN3P14138 238 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 IGHV1-2P23083 117 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 ANOS1P23352 680 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 TIMP3P35625 211 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 QRFPP83859 136 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 MALLQ13021 153 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 GFOD2Q3B7J2 385 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 CLVS2Q5SYC1 327 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 C1orf185Q5T7R7 199 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 C9orf135Q5VTT2 229 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF57Q68EA5 555 aaPredicted RBP9.57□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF585AQ6P3V2 769 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 NRARPQ7Z6K4 114 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 CDH24Q86UP0 819 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 PNLDC1Q8NA58 520 aaKnown RBP9.57□□□□□ -0.88
VTI1A-204ENST00000480057 FAM57AQ8TBR7 257 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 ENKURQ8TC29 256 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 CHAC2Q8WUX2 184 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 PIGTQ969N2 578 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 SOX7Q9BT81 388 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 SCPEP1Q9HB40 452 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 MOV10Q9HCE1 1003 aaKnown RBP9.57□□□□□ -0.88
VTI1A-204ENST00000480057 MRPS7Q9Y2R9 242 aaKnown RBP9.57□□□□□ -0.88
VTI1A-204ENST00000480057 CACNA1GO43497 2377 aa9.57□□□□□ -0.88
VTI1A-204ENST00000480057 LOC100509620A0A075B734 347 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 IGKV1-9A0A0C4DH69 117 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF816-ZNF321PA0A0X1KG74 233 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 NAP1L6A6NFF2 107 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 A6NIN4 97 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 TMEM14DPA8MWL7 114 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 WISP2O76076 250 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 CHRM2P08172 466 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 FAM157BP0CG42 384 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 SPNP16150 400 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 FAHP16930 419 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 APLNRP35414 380 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 UBE2NP61088 152 aaKnown RBP9.56□□□□□ -0.88
VTI1A-204ENST00000480057 DGCR2P98153 550 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 FAM3AP98173 230 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 P2RY6Q15077 328 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 UBE2V2Q15819 145 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 GABRA6Q16445 453 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 TOMM5Q8N4H5 51 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 KCNG3Q8TAE7 436 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 FAM46BQ96A09 425 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF75AQ96N20 296 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 REPIN1Q9BWE0 567 aaKnown RBP9.56□□□□□ -0.88
VTI1A-204ENST00000480057 ATG5Q9H1Y0 275 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 NOX3Q9HBY0 568 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 TAS2R8Q9NYW2 309 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 NPAP1Q9NZP6 1156 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 COPZ2Q9P299 210 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF107Q9UII5 783 aaPredicted RBP9.56□□□□□ -0.88
VTI1A-204ENST00000480057 PROCRQ9UNN8 238 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 MRPS28Q9Y2Q9 187 aaKnown RBP9.56□□□□□ -0.88
VTI1A-204ENST00000480057 CACNG2Q9Y698 323 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 MED12LQ86YW9 2145 aa9.56□□□□□ -0.88
VTI1A-204ENST00000480057 C5orf49A4QMS7 147 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF503-AS2A6NEH8 195 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 LANCL1O43813 399 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 ORC5O43913 435 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 TNFSF13O75888 250 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 CGAP01215 116 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 TMIGD3P0DMS9 266 aaPredicted RBP9.55□□□□□ -0.88
VTI1A-204ENST00000480057 VSIG8P0DPA2 414 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 NAT2P11245 290 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 ACKR3P25106 362 aa9.55□□□□□ -0.88
VTI1A-204ENST00000480057 SLC6A1P30531 599 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms