RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 PDE10AQ9Y233 779 aa4.01□□□□□ -1.77
UPF3A-205ENST00000479712 IKBKGQ9Y6K9 419 aa4.01□□□□□ -1.77
UPF3A-205ENST00000479712 TCRBV9S1A1TA0A576 114 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 CTAGE15A4D2H0 777 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 GABRR3A8MPY1 467 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 DEFB108AA8MXU0 73 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 NPIPA7E9PJI5 369 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 E9PLD3 99 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 H0YGG7 62 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 H3BMQ9 156 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 OR7A17O14581 309 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 HCRTR1O43613 425 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 ZNF354AO60765 605 aaPredicted RBP4□□□□□ -1.77
UPF3A-205ENST00000479712 BANF1O75531 89 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 GAS8-AS1O95177 125 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 LRATO95237 230 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 NSA2O95478 260 aaKnown RBP4□□□□□ -1.77
UPF3A-205ENST00000479712 CA1P00915 261 aaPredicted RBP4□□□□□ -1.77
UPF3A-205ENST00000479712 OPN1MWP04001 364 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 ANXA5P08758 320 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 H2BFMP0C1H6 154 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 SLC35E2P0CK97 266 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 NPIPA8P0DM63 369 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 OPN1MW2P0DN77 364 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 OPN1MW3P0DN78 364 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 BCL3P20749 454 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 MMP11P24347 488 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 PSMB5P28074 263 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 CRABP2P29373 138 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 PHBP35232 272 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 CCR8P51685 355 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 PLTPP55058 493 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 LIM2P55344 173 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 VSX2P58304 361 aaPredicted RBP4□□□□□ -1.77
UPF3A-205ENST00000479712 TAS2R39P59534 338 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 GPX6P59796 221 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 TBPL1P62380 186 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 SKP1P63208 163 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 C2orf54Q08AI8 447 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 RAB40BQ12829 278 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 CUL1Q13616 776 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 SERTAD2Q14140 314 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 LAGE3Q14657 143 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 DEFB110Q30KQ9 67 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 SBSNQ6UWP8 590 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 DNM1P46Q6ZS02 220 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 C3orf62Q6ZUJ4 267 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 CTAGE6Q86UF2 777 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 CEP112Q8N8E3 955 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 C15orf54Q8N8G6 183 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 EIF1ADQ8N9N8 165 aaKnown RBP4□□□□□ -1.77
UPF3A-205ENST00000479712 TTLQ8NG68 377 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 OR11G2Q8NGC1 345 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 OR5L2Q8NGL0 311 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 RERGQ96A58 199 aaPredicted RBP4□□□□□ -1.77
UPF3A-205ENST00000479712 C8orf44Q96CB5 159 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 TM4SF19Q96DZ7 209 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 C1orf147Q96MC9 270 aaPredicted RBP4□□□□□ -1.77
UPF3A-205ENST00000479712 CYTH2Q99418 400 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 LYSTQ99698 3801 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 RBBP8Q99708 897 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 CAPS2Q9BXY5 557 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 EHD1Q9H4M9 534 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 UFSP2Q9NUQ7 469 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 ZNF282Q9UDV7 671 aaPredicted RBP4□□□□□ -1.77
UPF3A-205ENST00000479712 MTRF1LQ9UGC7 380 aaKnown RBP4□□□□□ -1.77
UPF3A-205ENST00000479712 TAC3Q9UHF0 121 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 ZNF221Q9UK13 617 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 PTBP2Q9UKA9 531 aaKnown RBP4□□□□□ -1.77
UPF3A-205ENST00000479712 CLEC4AQ9UMR7 237 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 SAMD4AQ9UPU9 718 aaKnown RBP4□□□□□ -1.77
UPF3A-205ENST00000479712 SLC22A7Q9Y694 548 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 PCNX3Q9H6A9 2034 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 ALPK2Q86TB3 2170 aa4□□□□□ -1.77
UPF3A-205ENST00000479712 FAM220BPB1ANY3 271 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 FCN1O00602 326 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 HAT1O14929 419 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 TBX6O95947 436 aaPredicted RBP3.99□□□□□ -1.77
UPF3A-205ENST00000479712 SLC35G6P0C7Q6 338 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 PGAM2P15259 253 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 GATA1P15976 413 aaPredicted RBP3.99□□□□□ -1.77
UPF3A-205ENST00000479712 SERPINA2P20848 420 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 CALB2P22676 271 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 IGHV1-2P23083 117 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 CXCR2P25025 360 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 LAP3P28838 519 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 SERPINB1P30740 379 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 IL2RGP31785 369 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 XCR1P46094 333 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 SERPINB9P50453 376 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 RAB10P61026 200 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 REEP5Q00765 189 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 LOXL1Q08397 574 aaPredicted RBP3.99□□□□□ -1.77
UPF3A-205ENST00000479712 EXOC3L2Q2M3D2 409 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 TIMM50Q3ZCQ8 353 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 SPINK14Q6IE38 97 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 FRMPD2BQ6IN97 320 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 UFSP1Q6NVU6 142 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 COX15Q7KZN9 410 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 C16orf62Q7Z3J2 963 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms