RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 GDPGP1Q6ZNW5 385 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 FAM122BQ7Z309 247 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 DPPA2Q7Z7J5 298 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 TIGD4Q8IY51 512 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 GABRG1Q8N1C3 465 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 LNX2Q8N448 690 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 SYT14Q8NB59 555 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 CLEC18CQ8NCF0 446 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 OR52E2Q8NGJ4 325 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 OR52N1Q8NH53 320 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF519Q8TB69 540 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 ST8SIA4Q92187 359 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 HSD17B8Q92506 261 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 RBPMSQ93062 196 aaKnown RBP5.4□□□□□ -1.54
SF3B1-209ENST00000479532 MCHR2Q969V1 340 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 OTULINQ96BN8 352 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 RASD2Q96D21 266 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 MUCL1Q96DR8 90 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 SIGLEC11Q96RL6 698 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 C12orf57Q99622 126 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 SLC30A2Q9BRI3 323 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 MED18Q9BUE0 208 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 ACTR6Q9GZN1 396 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 DCSTAMPQ9H295 470 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 FN3KQ9H479 309 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 RIBC2Q9H4K1 309 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 NCOR1P1Q9H4R4 102 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 SMURF2Q9HAU4 748 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 SLC25A19Q9HC21 320 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 CRLF2Q9HC73 371 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 GPR35Q9HC97 309 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 NGBQ9NPG2 151 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 OBP2BQ9NPH6 170 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 BIN3Q9NQY0 253 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 SCN3BQ9NY72 215 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF226Q9NYT6 803 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 DUX4Q9UBX2 424 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 ZDHHC8Q9ULC8 765 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 COPS3Q9UNS2 423 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 AMDHD2Q9Y303 409 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 ADAM18Q9Y3Q7 739 aa5.4□□□□□ -1.54
SF3B1-209ENST00000479532 MAGED1Q9Y5V3 778 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-209ENST00000479532 DIDO1Q9BTC0 2240 aaKnown RBP5.4□□□□□ -1.55
SF3B1-209ENST00000479532 PRRC2CQ9Y520 2896 aaKnown RBP5.4□□□□□ -1.55
SF3B1-209ENST00000479532 HCFC1P51610 2035 aa5.4□□□□□ -1.55
SF3B1-209ENST00000479532 RPS10-NUDT3A0A1W2PQS6 291 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 SLC22A23A1A5C7 686 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 A1L4Q6 167 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 PRR23D1E9PI22 279 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-209ENST00000479532 BHLHE40O14503 412 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 DHHO43323 396 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 SLC16A7O60669 478 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 KHDRBS3O75525 346 aaKnown RBP5.39□□□□□ -1.55
SF3B1-209ENST00000479532 RAF1P04049 648 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 ITGA5P08648 1049 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 HTR1AP08908 422 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 PRR23D2P0DMB1 279 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-209ENST00000479532 COX6B1P14854 86 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF20P17024 532 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 CD53P19397 219 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 MYL9P24844 172 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 CAPZA2P47755 286 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 VEGFCP49767 419 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 FXYD6P3P58550 94 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 CDC42P60953 191 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 BTG1P62324 171 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 CDK5Q00535 292 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 HSF2Q03933 536 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 GLO1Q04760 184 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 TFF3Q07654 80 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 SRSF1Q07955 248 aaKnown RBP eCLIP5.39□□□□□ -1.55
SF3B1-209ENST00000479532 FAM27E3Q08E93 113 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 NPRL3Q12980 569 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 GINS1Q14691 196 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 PPA1Q15181 289 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 PTGES3Q15185 160 aaKnown RBP5.39□□□□□ -1.55
SF3B1-209ENST00000479532 SNAPC1Q16533 368 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 NRN1LQ496H8 165 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 PABPC1L2AQ5JQF8 200 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 TIMM23BQ5SRD1 257 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 DNLZQ5SXM8 178 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 C10orf128Q5T292 105 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 C9orf135Q5VTT2 229 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF691Q5VV52 312 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 NHLRC1Q6VVB1 395 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 STAC2Q6ZMT1 411 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 MEX3BQ6ZN04 569 aaKnown RBP5.39□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF813Q6ZN06 617 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 HSD17B13Q7Z5P4 300 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-209ENST00000479532 STPG2Q8N412 459 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 C9orf62Q8N4C0 152 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF433Q8N7K0 673 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-209ENST00000479532 DUSP18Q8NEJ0 188 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 SDR9C7Q8NEX9 313 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 OR10H5Q8NGA6 315 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 OR4M2Q8NGB6 313 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 OR4M1Q8NGD0 313 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 OR8D4Q8NGM9 314 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 OR1K1Q8NGR3 316 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 OR2T4Q8NH00 348 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms