RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 RBFOX3A6NFN3 312 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 A6NJ64 397 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 SCGB1D2O95969 90 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 FOSL2P15408 326 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 GABRR1P24046 479 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 CXCR1P25024 350 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 LBX1P52954 281 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 RBX1P62877 108 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 SQSTM1Q13501 440 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 TMEM184AQ6ZMB5 413 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 Q6ZNB5 142 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 GRASPQ7Z6J2 395 aaPredicted RBP18.9■□□□□ 0.62
SDF4-206ENST00000478938 OR1P1Q8NH06 330 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 OVCA2Q8WZ82 227 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 RSPRY1Q96DX4 576 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 MEMO1Q9Y316 297 aa18.9■□□□□ 0.62
SDF4-206ENST00000478938 TRMT12Q53H54 448 aaKnown RBP18.89■□□□□ 0.62
SDF4-206ENST00000478938 RTN4RL1Q86UN2 441 aaPredicted RBP18.89■□□□□ 0.62
SDF4-206ENST00000478938 CMTM8Q8IZV2 173 aa18.89■□□□□ 0.62
SDF4-206ENST00000478938 ZNF461Q8TAF7 563 aa18.89■□□□□ 0.62
SDF4-206ENST00000478938 MYOTQ9UBF9 498 aa18.89■□□□□ 0.62
SDF4-206ENST00000478938 CKLFQ9UBR5 152 aa18.89■□□□□ 0.62
SDF4-206ENST00000478938 HSF4Q9ULV5 492 aa18.89■□□□□ 0.62
SDF4-206ENST00000478938 CYP8B1Q9UNU6 501 aa18.89■□□□□ 0.62
SDF4-206ENST00000478938 RFNGQ9Y644 331 aa18.89■□□□□ 0.62
SDF4-206ENST00000478938 IFNL4K9M1U5 179 aa18.89■□□□□ 0.61
SDF4-206ENST00000478938 SOX1O00570 391 aaPredicted RBP18.89■□□□□ 0.61
SDF4-206ENST00000478938 ZNF217O75362 1048 aa18.89■□□□□ 0.61
SDF4-206ENST00000478938 PNPP00491 289 aa18.89■□□□□ 0.61
SDF4-206ENST00000478938 SRP19P09132 144 aaKnown RBP18.89■□□□□ 0.61
SDF4-206ENST00000478938 SELEP16581 610 aa18.89■□□□□ 0.61
SDF4-206ENST00000478938 ALOX5APP20292 161 aa18.89■□□□□ 0.61
SDF4-206ENST00000478938 EMDP50402 254 aa18.89■□□□□ 0.61
SDF4-206ENST00000478938 FCRL6Q6DN72 434 aa18.89■□□□□ 0.61
SDF4-206ENST00000478938 ZNF283Q8N7M2 679 aa18.89■□□□□ 0.61
SDF4-206ENST00000478938 OR4X1Q8NH49 305 aa18.89■□□□□ 0.61
SDF4-206ENST00000478938 RNASE8Q8TDE3 154 aaKnown RBP18.89■□□□□ 0.61
SDF4-206ENST00000478938 TVP23CQ96ET8 276 aa18.89■□□□□ 0.61
SDF4-206ENST00000478938 RTBDNQ9BSG5 229 aaPredicted RBP18.89■□□□□ 0.61
SDF4-206ENST00000478938 LPAR2Q9HBW0 351 aa18.89■□□□□ 0.61
SDF4-206ENST00000478938 FTCDNL1E5RQL4 147 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 ARPC3O15145 178 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 DEDDO75618 318 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 TK1P04183 234 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 EPHA1P21709 976 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 RND3P61587 244 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 RNF44Q7L0R7 432 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 ZNF573Q86YE8 665 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 METTL21AQ8WXB1 218 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 TPSD1Q9BZJ3 242 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 ELOVL3Q9HB03 270 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 A0A1B0GW64 132 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 MBPP02686 304 aaPredicted RBP18.88■□□□□ 0.61
SDF4-206ENST00000478938 FBXO46Q6PJ61 603 aaPredicted RBP18.88■□□□□ 0.61
SDF4-206ENST00000478938 KIRREL2Q6UWL6 708 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 SLC35D2Q76EJ3 337 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 FIBINQ8TAL6 211 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 SLC25A44Q96H78 314 aaPredicted RBP18.88■□□□□ 0.61
SDF4-206ENST00000478938 LPAR4Q99677 370 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 OR52A1Q9UKL2 312 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 STRAPQ9Y3F4 350 aaKnown RBP18.88■□□□□ 0.61
SDF4-206ENST00000478938 LIPGQ9Y5X9 500 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 MYOFQ9NZM1 2061 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 TMEM210A6NLX4 147 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 CEBPEQ15744 281 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 ABLIM2Q6H8Q1 611 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 ZNF705AQ6ZN79 300 aaPredicted RBP18.88■□□□□ 0.61
SDF4-206ENST00000478938 LRRC25Q8N386 305 aaPredicted RBP18.88■□□□□ 0.61
SDF4-206ENST00000478938 LFNGQ8NES3 379 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 ASB5Q8WWX0 329 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 FOXN4Q96NZ1 517 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 GINS3Q9BRX5 216 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 NIPSNAP3BQ9BS92 247 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 CHST11Q9NPF2 352 aa18.88■□□□□ 0.61
SDF4-206ENST00000478938 METTL12A8MUP2 240 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 TIMP1P01033 207 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 IRF2P14316 349 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 GLRA1P23415 457 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 ID2Q02363 134 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 PTCRAQ6ISU1 281 aaPredicted RBP18.87■□□□□ 0.61
SDF4-206ENST00000478938 PLXDC2Q6UX71 529 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 MKKSQ9NPJ1 570 aaPredicted RBP18.87■□□□□ 0.61
SDF4-206ENST00000478938 XIRP2A4UGR9 3374 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 BORCS7-ASMTA0A0B4J1R7 106 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 ERGP11308 486 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 SUCLG1P53597 346 aaKnown RBP18.87■□□□□ 0.61
SDF4-206ENST00000478938 NTHL1P78549 312 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 COL10A1Q03692 680 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 MFGE8Q08431 387 aaPredicted RBP18.87■□□□□ 0.61
SDF4-206ENST00000478938 ABHD14AQ9BUJ0 271 aa18.87■□□□□ 0.61
SDF4-206ENST00000478938 SIAH2O43255 324 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 NUDT21O43809 227 aaKnown RBP18.86■□□□□ 0.61
SDF4-206ENST00000478938 CRTAPO75718 401 aaPredicted RBP18.86■□□□□ 0.61
SDF4-206ENST00000478938 TBPP20226 339 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 ACAA2P42765 397 aaKnown RBP18.86■□□□□ 0.61
SDF4-206ENST00000478938 FAM185AQ8N0U4 392 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 C17orf78Q8N4C9 275 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 OR2L8Q8NGY9 312 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 HHIPL1Q96JK4 782 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms