RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 SLC13A4Q9UKG4 626 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 HILPDAQ9Y5L2 63 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 LHFPL6Q9Y693 200 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 DNAH2Q9P225 4427 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 IGLV1-36A0A0B4J1U3 117 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 TRAPPC13A5PLN9 417 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 SIGLEC5O15389 551 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 ARG1P05089 322 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 DYNLT3P51808 116 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 CTXN1P60606 82 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 CDK6Q00534 326 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 ZNF273Q14593 569 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 DUSP7Q16829 419 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 MESTQ5EB52 335 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 GCNT6Q5T4J0 391 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 REEP3Q6NUK4 255 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 CFAP77Q6ZQR2 320 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 LCNL1Q6ZST4 164 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 MRPL21Q7Z2W9 205 aaKnown RBP9.61□□□□□ -0.87
HDAC8-217ENST00000478743 ZNF572Q7Z3I7 529 aaPredicted RBP9.61□□□□□ -0.87
HDAC8-217ENST00000478743 MICU2Q8IYU8 434 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 ZNRF1Q8ND25 227 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 OR5K1Q8NHB7 308 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 ANGPTL6Q8NI99 470 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 FOXRED1Q96CU9 486 aaPredicted RBP9.61□□□□□ -0.87
HDAC8-217ENST00000478743 ZIM3Q96PE6 472 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 RAB3IPQ96QF0 476 aaPredicted RBP9.61□□□□□ -0.87
HDAC8-217ENST00000478743 HEXA-AS1Q9H8Q6 139 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 RNPEPL1Q9HAU8 725 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 HAO2Q9NYQ3 351 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 SLC25A37Q9NYZ2 338 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 LINC00527Q9UJ94 153 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 LYVE1Q9Y5Y7 322 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 DNAH11Q96DT5 4516 aa9.61□□□□□ -0.87
HDAC8-217ENST00000478743 MEX3AA1L020 520 aaKnown RBP9.6□□□□□ -0.87
HDAC8-217ENST00000478743 CLIC1O00299 241 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 LDLRAD4O15165 306 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 LCATP04180 440 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 GGT2P36268 569 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 OR3A4PP47883 348 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 SLC25A1P53007 311 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 HIST1H3AP68431 136 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 SLC34A1Q06495 639 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 FHL1Q13642 323 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 C9orf152Q5JTZ5 239 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 HIST2H3PS2Q5TEC6 136 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 SLC2A7Q6PXP3 512 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 HIST2H3AQ71DI3 136 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 KRT73Q86Y46 540 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 ARMC8Q8IUR7 673 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 ZNF695Q8IW36 515 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 SLC26A10Q8NG04 563 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 OR1M1Q8NGA1 313 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 OR56B2PQ8NGI1 322 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 C12orf43Q96C57 262 aaKnown RBP9.6□□□□□ -0.87
HDAC8-217ENST00000478743 SPATA5L1Q9BVQ7 753 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 IKZF5Q9H5V7 419 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 COA3Q9Y2R0 106 aaPredicted RBP9.6□□□□□ -0.87
HDAC8-217ENST00000478743 ADAM18Q9Y3Q7 739 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 HSPG2P98160 4391 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 DNAH6Q9C0G6 4158 aa9.6□□□□□ -0.87
HDAC8-217ENST00000478743 TEX13CA0A0J9YWL9 993 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 F5H5K5 113 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 CDIPTO14735 213 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 SLC25A17O43808 307 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 GLCEO94923 617 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 SPNP16150 400 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 GP2P55259 537 aaKnown RBP9.59□□□□□ -0.87
HDAC8-217ENST00000478743 FADDQ13158 208 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 SCARB2Q14108 478 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 C6orf10Q5SRN2 563 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 GLYATL3Q5SZD4 288 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 ZNF626Q68DY1 528 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 TMEM200BQ69YZ2 307 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 OGFOD2Q6N063 350 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 DPY19L4Q7Z388 723 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 DPP10Q8N608 796 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 TMEM185AQ8NFB2 350 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 OR9I1Q8NGQ6 314 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 OR4Q3Q8NH05 313 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 EPS8L3Q8TE67 593 aaKnown RBP9.59□□□□□ -0.87
HDAC8-217ENST00000478743 MALSU1Q96EH3 234 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 APOPT1Q96IL0 206 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 MPP4Q96JB8 637 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 SLC25A33Q9BSK2 321 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 SLC22A4Q9H015 551 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 HDHD2Q9H0R4 259 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 RERGLQ9H628 205 aa9.59□□□□□ -0.87
HDAC8-217ENST00000478743 TBL2Q9Y4P3 447 aaKnown RBP9.59□□□□□ -0.87
HDAC8-217ENST00000478743 IGKV1D-17A0A075B6S4 117 aa9.58□□□□□ -0.88
HDAC8-217ENST00000478743 TRAV27A0A087WT01 109 aa9.58□□□□□ -0.88
HDAC8-217ENST00000478743 PRORSD1PA6NEY8 169 aa9.58□□□□□ -0.88
HDAC8-217ENST00000478743 GGT3PA6NGU5 568 aa9.58□□□□□ -0.88
HDAC8-217ENST00000478743 SDHDO14521 159 aa9.58□□□□□ -0.88
HDAC8-217ENST00000478743 AKR7A2O43488 359 aa9.58□□□□□ -0.88
HDAC8-217ENST00000478743 SPAG7O75391 227 aa9.58□□□□□ -0.88
HDAC8-217ENST00000478743 ACAA1P09110 424 aaPredicted RBP9.58□□□□□ -0.88
HDAC8-217ENST00000478743 IGHV4-30-4P0DP06 118 aa9.58□□□□□ -0.88
HDAC8-217ENST00000478743 AZGP1P25311 298 aaKnown RBP9.58□□□□□ -0.88
HDAC8-217ENST00000478743 SDHAP31040 664 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms