RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 FAM169BQ8N8A8 192 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 CPEB3Q8NE35 698 aaKnown RBP12.34□□□□□ -0.43
USP11-207ENST00000478596 IL17RDQ8NFM7 739 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 OR10S1Q8NGN2 331 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 DOK1Q99704 481 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 MND1Q9BWT6 205 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 YTHDF1Q9BYJ9 559 aaKnown RBP12.34□□□□□ -0.43
USP11-207ENST00000478596 NIPAL2Q9H841 368 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 ELOVL3Q9HB03 270 aa12.34□□□□□ -0.43
USP11-207ENST00000478596 MRPS18AQ9NVS2 196 aaKnown RBP12.34□□□□□ -0.43
USP11-207ENST00000478596 CRNNQ9UBG3 495 aaPredicted RBP12.34□□□□□ -0.43
USP11-207ENST00000478596 FBXO9Q9UK97 447 aaPredicted RBP12.34□□□□□ -0.43
USP11-207ENST00000478596 IGHV2OR16-5A0A0B4J2B6 119 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 MAGEB4O15481 346 aaPredicted RBP12.33□□□□□ -0.44
USP11-207ENST00000478596 ZNF254O75437 659 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 PNPP00491 289 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 IGLV1-44P01699 117 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 MT-ND2P03891 347 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 MT-ND5P03915 603 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 LCATP04180 440 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 LCKP06239 509 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 SLC2A1P11166 492 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 GCH1P30793 250 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 RGS6P49758 472 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 ETV1P50549 477 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 PSMA6P60900 246 aaKnown RBP12.33□□□□□ -0.44
USP11-207ENST00000478596 SLC35A2P78381 396 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 SNTB2Q13425 540 aaKnown RBP12.33□□□□□ -0.44
USP11-207ENST00000478596 EFNB3Q15768 340 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 BCL2L15Q5TBC7 163 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 VHLLQ6RSH7 139 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 ZNF584Q8IVC4 421 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 ABHD4Q8TB40 342 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 NEU4Q8WWR8 484 aaPredicted RBP12.33□□□□□ -0.44
USP11-207ENST00000478596 PGAM5Q96HS1 289 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 DCLRE1CQ96SD1 692 aaKnown RBP12.33□□□□□ -0.44
USP11-207ENST00000478596 KCNJ15Q99712 375 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 PLK3Q9H4B4 646 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 SP140LQ9H930 580 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 VCX3AQ9NNX9 186 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 PNRC2Q9NPJ4 139 aaKnown RBP12.33□□□□□ -0.44
USP11-207ENST00000478596 ACOXLQ9NUZ1 547 aa12.33□□□□□ -0.44
USP11-207ENST00000478596 PAK1IP1Q9NWT1 392 aaPredicted RBP12.33□□□□□ -0.44
USP11-207ENST00000478596 LOC100509620A0A075B734 347 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 LOC105371242A0A075B767 164 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 LOC110117498-PIK3R3F6TDL0 507 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 AVPP01185 164 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 HTR1AP08908 422 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 GBX2P52951 348 aaPredicted RBP12.32□□□□□ -0.44
USP11-207ENST00000478596 ZNF121P58317 390 aaPredicted RBP12.32□□□□□ -0.44
USP11-207ENST00000478596 RPS23P62266 143 aaKnown RBP12.32□□□□□ -0.44
USP11-207ENST00000478596 MALLQ13021 153 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 KCTD21Q4G0X4 260 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 FAHD2BQ6P2I3 314 aaPredicted RBP12.32□□□□□ -0.44
USP11-207ENST00000478596 DEGS2Q6QHC5 323 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 DRAM2Q6UX65 266 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 FAM57BQ71RH2 274 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 C1QL2Q7Z5L3 287 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 BPIFB2Q8N4F0 458 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 OR51F2Q8NH61 342 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 SGCDQ92629 289 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 FAHD2AQ96GK7 314 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 POM121L2Q96KW2 1035 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 C4orf45Q96LM5 186 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 MMP27Q9H306 513 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 FKBP14Q9NWM8 211 aa12.32□□□□□ -0.44
USP11-207ENST00000478596 MRM2Q9UI43 246 aaKnown RBP12.32□□□□□ -0.44
USP11-207ENST00000478596 CAB39Q9Y376 341 aaPredicted RBP12.32□□□□□ -0.44
USP11-207ENST00000478596 TRAV20A0A0B4J274 112 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 TMEM269A0A1B0GVZ9 245 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 PRR32B1ATL7 298 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 J3QRE1 110 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 SULT1C4O75897 302 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 ERCC1P07992 297 aaPredicted RBP12.31□□□□□ -0.44
USP11-207ENST00000478596 ACSM4P0C7M7 580 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 LIMS3P0CW19 117 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 LIMS4P0CW20 117 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 C21orf33P30042 268 aaPredicted RBP12.31□□□□□ -0.44
USP11-207ENST00000478596 CALCRP30988 508 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 RBMXP38159 391 aaKnown RBP12.31□□□□□ -0.44
USP11-207ENST00000478596 PSMB10P40306 273 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 ROM1Q03395 351 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 MVKQ03426 396 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 MED22Q15528 200 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 TIGD6Q17RP2 521 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 CDONQ4KMG0 1287 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 SPATA46Q5T0L3 261 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 OR2G6Q5TZ20 316 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 RFPL4BQ6ZWI9 263 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 PRSS48Q7RTY5 328 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 SYS1Q8N2H4 156 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 PAQR4Q8N4S7 273 aaPredicted RBP12.31□□□□□ -0.44
USP11-207ENST00000478596 SPRYD4Q8WW59 207 aaPredicted RBP12.31□□□□□ -0.44
USP11-207ENST00000478596 APOBEC3DQ96AK3 386 aaPredicted RBP12.31□□□□□ -0.44
USP11-207ENST00000478596 JAM3Q9BX67 310 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 MOB1AQ9H8S9 216 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 LPAR2Q9HBW0 351 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 TRIM36Q9NQ86 728 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 CA10Q9NS85 328 aa12.31□□□□□ -0.44
USP11-207ENST00000478596 CLEC2DQ9UHP7 191 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms