RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 YIPF3Q9GZM5 350 aa19.57■□□□□ 0.72
C9orf3-215ENST00000478473 GABARAPL1Q9H0R8 117 aa19.57■□□□□ 0.72
C9orf3-215ENST00000478473 OR10A2Q9H208 303 aa19.57■□□□□ 0.72
C9orf3-215ENST00000478473 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.56■□□□□ 0.72
C9orf3-215ENST00000478473 ZNF205O95201 554 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 LHBP01229 141 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 SNCBQ16143 134 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 SNAPC1Q16533 368 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 TIGD6Q17RP2 521 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 KDM4DQ6B0I6 523 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 ZNF841Q6ZN19 808 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 FAM57BQ71RH2 274 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 UFSP2Q9NUQ7 469 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 C14orf119Q9NWQ9 140 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 TVP23BQ9NYZ1 205 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 OR5V1Q9UGF6 321 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 ZNF391Q9UJN7 358 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 KLHDC2Q9Y2U9 406 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 AP4S1Q9Y587 144 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 AUP1Q9Y679 476 aa19.56■□□□□ 0.72
C9orf3-215ENST00000478473 CCDC182A6NF36 153 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 ANKRD30BLA7E2S9 258 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 LGALS8O00214 317 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 PHYHO14832 338 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 TBX1O43435 398 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 FASP25445 335 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 DCTDP32321 178 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 GSK3AP49840 483 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 PSMA6P60900 246 aaKnown RBP19.55■□□□□ 0.72
C9orf3-215ENST00000478473 NLRC3Q7RTR2 1065 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 CSNK2A3Q8NEV1 391 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 OR8B3Q8NGG8 313 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 THEM6Q8WUY1 208 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 RAB40AQ8WXH6 277 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 OR8B2Q96RD0 313 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 TRIM36Q9NQ86 728 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 KIF17Q9P2E2 1029 aa19.55■□□□□ 0.72
C9orf3-215ENST00000478473 ACOD1A6NK06 481 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 G3V2T6 193 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 NDUFA2O43678 99 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 CD80P33681 288 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 CFHR2P36980 270 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 GNB2P62879 340 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 ROM1Q03395 351 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 APOFQ13790 326 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 KCNJ8Q15842 424 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 KLF17Q5JT82 389 aaPredicted RBP19.54■□□□□ 0.72
C9orf3-215ENST00000478473 SLX4IPQ5VYV7 408 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 LRRN1Q6UXK5 716 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.54■□□□□ 0.72
C9orf3-215ENST00000478473 C11orf53Q8IXP5 236 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 JMJD8Q96S16 334 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 SUCNR1Q9BXA5 334 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 PRRG3Q9BZD7 231 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 RNPEPL1Q9HAU8 725 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 N6AMT1Q9Y5N5 214 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 DOCK11Q5JSL3 2073 aa19.54■□□□□ 0.72
C9orf3-215ENST00000478473 IGHV2-70DA0A0C4DH43 119 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 KIR2DS1A0A191URI9 304 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 ZAR1LA6NP61 321 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 FCGR1AP12314 374 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 NAA10P41227 235 aaPredicted RBP19.53■□□□□ 0.72
C9orf3-215ENST00000478473 PITPNBP48739 271 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 NPY4RP50391 375 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 C1orf146Q5VVC0 180 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 WDR25Q64LD2 544 aaPredicted RBP19.53■□□□□ 0.72
C9orf3-215ENST00000478473 LYPD2Q6UXB3 125 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 WDR86Q86TI4 376 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 ZDHHC13Q8IUH4 622 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 GCSAMQ8N6F7 178 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 PGAM5Q96HS1 289 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 MRI1Q9BV20 369 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 TLNRD1Q9H1K6 362 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 DNAJC27Q9NZQ0 273 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 NUP50Q9UKX7 468 aa19.53■□□□□ 0.72
C9orf3-215ENST00000478473 PRKYO43930 277 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 FPR2P25090 351 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 EPHA2P29317 976 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 C11orf91Q3C1V1 193 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 LCN1P1Q5VSP4 162 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 AADACL4Q5VUY2 407 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 TEX36Q5VZQ5 186 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 C12orf73Q69YU5 71 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 KCTD18Q6PI47 426 aaPredicted RBP19.52■□□□□ 0.72
C9orf3-215ENST00000478473 ASRGL1Q7L266 308 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 GALNT4Q8N4A0 578 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 FTMTQ8N4E7 242 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 FAM216AQ8WUB2 273 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 UPRTQ96BW1 309 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 ITPKCQ96DU7 683 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 ABCB9Q9NP78 766 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 KRT84Q9NSB2 600 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 C1orf123Q9NWV4 160 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 HAO2Q9NYQ3 351 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 CLN8Q9UBY8 286 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 ENOPH1Q9UHY7 261 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 LAMP5Q9UJQ1 280 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 LRP12Q9Y561 859 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 MPC1Q9Y5U8 109 aa19.52■□□□□ 0.72
C9orf3-215ENST00000478473 TMEM14AQ9Y6G1 99 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms