RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 MT-ND1P03886 318 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 CST2P09228 141 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 RPS2P15880 293 aaKnown RBP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 ZNF26P17031 533 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 PSMB10P40306 273 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 MRPL19P49406 292 aaKnown RBP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 GZMMP51124 257 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 ZNF84P51523 738 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 DLX1P56177 255 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 NCALDP61601 193 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 LCN6P62502 163 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 ELF3P78545 371 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 PRB3Q04118 309 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 IFFO1Q0D2I5 559 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 TAF9Q16594 264 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 TIGD6Q17RP2 521 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 RSPO1Q2MKA7 263 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 ZNF404Q494X3 552 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 WDR25Q64LD2 544 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 OR2T2Q6IF00 324 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 SLC27A4Q6P1M0 643 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 TTC33Q6PID6 262 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 EPGNQ6UW88 154 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 C17orf107Q6ZR85 190 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 NANOGNBQ7Z5D8 188 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 IGFN1Q86VF2 1251 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 SPARTQ8N0X7 666 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 OR5AS1Q8N127 324 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 MUC20Q8N307 709 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 MREGQ8N565 214 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 PCYOX1LQ8NBM8 494 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 OR10AD1Q8NGE0 317 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 TMEM255BQ8WV15 326 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 LIPHQ8WWY8 451 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 HAVCR1Q96D42 359 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 SPDL1Q96EA4 605 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 PAIP2Q9BPZ3 127 aaKnown RBP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 EBF4Q9BQW3 602 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 NUDT16L1Q9BRJ7 211 aaKnown RBP3.76□□□□□ -1.81
CKS1B-207ENST00000477676 SEMA6AQ9H2E6 1030 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 LRMDAQ9H2I8 198 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 TXNIPQ9H3M7 391 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 NANOGQ9H9S0 305 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 BEX1Q9HBH7 125 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 KCNK9Q9NPC2 374 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 CCNB1IP1Q9NPC3 277 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 POLE4Q9NR33 117 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 INIPQ9NRY2 104 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 CYSLTR2Q9NS75 346 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 THAP1Q9NVV9 213 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 SELENONQ9NZV5 590 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 CTSZQ9UBR2 303 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 OR5V1Q9UGF6 321 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 IL19Q9UHD0 177 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 IL20RAQ9UHF4 553 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 ANGPT4Q9Y264 503 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 FRAS1Q86XX4 4008 aa3.76□□□□□ -1.81
CKS1B-207ENST00000477676 A0A0U1RQK1 487 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 A0A1B0GW55 424 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 A0A1W2PRG6 482 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 A0A1W2PRQ8 180 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 TMEM120BA0PK00 339 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 PRORSD1PA6NEY8 169 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 OR6C6A6NF89 314 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 NPIPB13A6NJU9 1138 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 NPIPB4C9JG80 1138 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 F5H5P2 479 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 RAB27BO00194 218 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 TIMM23O14925 209 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 RGS16O15492 202 aaPredicted RBP3.75□□□□□ -1.81
CKS1B-207ENST00000477676 HLA-DPB1P04440 258 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 DUX4L2P0CJ85 424 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 DUX4L3P0CJ86 424 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 DUX4L4P0CJ87 422 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 DUX4L5P0CJ88 424 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 DUX4L6P0CJ89 424 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 DUX4L7P0CJ90 424 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 UMPSP11172 480 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 BTF3P20290 206 aaKnown RBP3.75□□□□□ -1.81
CKS1B-207ENST00000477676 CFHR2P36980 270 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 IER3P46695 156 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 PITPNBP48739 271 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 MTPNP58546 118 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 GNB2P62879 340 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 CD47Q08722 323 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 MAB21L1Q13394 359 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 TAF11Q15544 211 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 CLEC12AQ5QGZ9 265 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 DUX4L9Q6RFH8 374 aaPredicted RBP3.75□□□□□ -1.81
CKS1B-207ENST00000477676 LRRN1Q6UXK5 716 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 ZNF620Q6ZNG0 422 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 MOGAT3Q86VF5 341 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 C1orf174Q8IYL3 243 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 TMEM86BQ8N661 226 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 ZSCAN4Q8NAM6 433 aaPredicted RBP3.75□□□□□ -1.81
CKS1B-207ENST00000477676 SLC30A2Q9BRI3 323 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 PCGF1Q9BSM1 259 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 ALG12Q9BV10 488 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 SLC19A3Q9BZV2 496 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms