RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MEGF9Q9H1U4 602 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 METTL8Q9H825 291 aaKnown RBP9.24□□□□□ -0.93
BRCA1-213ENST00000476777 RNPEPL1Q9HAU8 725 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.24□□□□□ -0.93
BRCA1-213ENST00000476777 CYB5R1Q9UHQ9 305 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 B9D1Q9UPM9 204 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 SIGLEC7Q9Y286 467 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 IER3IP1Q9Y5U9 82 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 V9GYY5 206 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-213ENST00000476777 RYR2Q92736 4967 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 WI2-2373I1.2A0A1W2PRP0 233 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 M0R135 149 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 M0R1W7 72 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 FXYD1O00168 92 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 BHLHE40O14503 412 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 SELLP14151 372 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 CD33P20138 364 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 PAX6P26367 422 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 KDELR2P33947 212 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 TPTEP56180 551 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 FXYD6P3P58550 94 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 MZT1Q08AG7 82 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 HABP2Q14520 560 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-213ENST00000476777 LRRC10Q5BKY1 277 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 DEFB121Q5J5C9 76 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 ATPAF1Q5TC12 328 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-213ENST00000476777 PGBD2Q6P3X8 592 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 ERICH5Q6P6B1 374 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 WDR86Q86TI4 376 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 OR6V1Q8N148 313 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 Q8N2B8 174 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 DTX3Q8N9I9 347 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 OR56B2PQ8NGI1 322 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 PIFOQ8TCI5 191 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 C12orf43Q96C57 262 aaKnown RBP9.23□□□□□ -0.93
BRCA1-213ENST00000476777 ZNF799Q96GE5 643 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 SH3GL1Q99961 368 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 ZNF702PQ9H963 129 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 C14orf119Q9NWQ9 140 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 SF3B6Q9Y3B4 125 aaKnown RBP9.23□□□□□ -0.93
BRCA1-213ENST00000476777 BIRC6Q9NR09 4857 aa9.23□□□□□ -0.93
BRCA1-213ENST00000476777 DYNC2H1Q8NCM8 4307 aaKnown RBP9.22□□□□□ -0.93
BRCA1-213ENST00000476777 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-213ENST00000476777 IFNW1P05000 195 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 GRK5P34947 590 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 KRTAP10-11P60412 298 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 CSNK2BP67870 215 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 RFX4Q33E94 735 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 GLYATL3Q5SZD4 288 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 STUMQ69YW2 141 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 DNM1P34Q6PK57 102 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 WDR82Q6UXN9 313 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 DPY19L2P2Q6ZN68 376 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 LIAT1Q6ZQX7 453 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 VTCN1Q7Z7D3 282 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 LNX2Q8N448 690 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 PAPD5Q8NDF8 572 aaKnown RBP9.22□□□□□ -0.93
BRCA1-213ENST00000476777 OR1M1Q8NGA1 313 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 OR5T2Q8NGG2 359 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 OR2AJ1Q8NGZ0 328 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 LZICQ8WZA0 190 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 H1FXQ92522 213 aaKnown RBP9.22□□□□□ -0.93
BRCA1-213ENST00000476777 FAM46AQ96IP4 442 aaKnown RBP9.22□□□□□ -0.93
BRCA1-213ENST00000476777 MAP6Q96JE9 813 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 SRA1Q9HD15 236 aaKnown RBP9.22□□□□□ -0.93
BRCA1-213ENST00000476777 TMEM5Q9Y2B1 443 aa9.22□□□□□ -0.93
BRCA1-213ENST00000476777 EPPK1P58107 5090 aaKnown RBP9.21□□□□□ -0.93
BRCA1-213ENST00000476777 OTX1P32242 354 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-213ENST00000476777 MSX2P35548 267 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-213ENST00000476777 RPS6KA3P51812 740 aa9.21□□□□□ -0.94
BRCA1-213ENST00000476777 BMXP51813 675 aa9.21□□□□□ -0.94
BRCA1-213ENST00000476777 CD69Q07108 199 aa9.21□□□□□ -0.94
BRCA1-213ENST00000476777 RRM2BQ7LG56 351 aa9.21□□□□□ -0.94
BRCA1-213ENST00000476777 OR9Q1Q8NGQ5 310 aa9.21□□□□□ -0.94
BRCA1-213ENST00000476777 STON2Q8WXE9 905 aa9.21□□□□□ -0.94
BRCA1-213ENST00000476777 SPTSSAQ969W0 71 aa9.21□□□□□ -0.94
BRCA1-213ENST00000476777 DUS3LQ96G46 650 aaKnown RBP9.21□□□□□ -0.94
BRCA1-213ENST00000476777 NKX3-1Q99801 234 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-213ENST00000476777 OCSTAMPQ9BR26 566 aa9.21□□□□□ -0.94
BRCA1-213ENST00000476777 WNT10AQ9GZT5 417 aa9.21□□□□□ -0.94
BRCA1-213ENST00000476777 CAPN7Q9Y6W3 813 aa9.21□□□□□ -0.94
BRCA1-213ENST00000476777 A0A1W2PQ09 198 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 FAM220BPB1ANY3 271 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 ANGPTL7O43827 346 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 TFF1P04155 84 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 FAHP16930 419 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 OMPP47874 163 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 BLMHQ13867 455 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 DGUOKQ16854 277 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 SLC36A3Q495N2 470 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 DRAM2Q6UX65 266 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 DPY19L4Q7Z388 723 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 ZBTB46Q86UZ6 589 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 OR5D13Q8NGL4 314 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 OR8S1Q8NH09 359 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 RSRC1Q96IZ7 334 aaKnown RBP9.2□□□□□ -0.94
BRCA1-213ENST00000476777 GAFA1Q96PS6 74 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 NMNAT3Q96T66 252 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 DDOQ99489 341 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 B9D2Q9BPU9 175 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms