RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CSKP41240 450 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 CXCL12P48061 93 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 CARD18P57730 90 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 TAS2R31P59538 309 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 YWHAEP62258 255 aaKnown RBP3.48□□□□□ -1.85
VPS50-212ENST00000476413 MOBPQ13875 183 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 C16orf72Q14CZ0 275 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 WDR43Q15061 677 aaKnown RBP eCLIP3.48□□□□□ -1.85
VPS50-212ENST00000476413 OR2T5Q6IEZ7 315 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 OR2W3Q7Z3T1 314 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 OR2L8Q8NGY9 312 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 OR2T29Q8NH02 315 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 ASZ1Q8WWH4 475 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 TEAD3Q99594 435 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 CHRNA10Q9GZZ6 450 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 A0A0J9YYE9 177 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 HACD1B0YJ81 288 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 SERPINB7O75635 380 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 TRBC1P01850 177 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 ZNF806P0C7X5 589 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 TALDO1P37837 337 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 PNOCQ13519 176 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 EIF4EBP2Q13542 120 aaPredicted RBP3.47□□□□□ -1.85
VPS50-212ENST00000476413 OR1Q1Q15612 314 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 C16orf87Q6PH81 154 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 RTL4Q6ZR62 310 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 DAW1Q8N136 415 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 WDR31Q8NA23 367 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 TMEM104Q8NE00 496 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 C17orf50Q8WW18 174 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 RNF5Q99942 180 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 TREX1Q9NSU2 369 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 RBFOX1Q9NWB1 397 aaKnown RBP3.47□□□□□ -1.85
VPS50-212ENST00000476413 SLIT3O75094 1523 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 C2orf16Q68DN1 1984 aa3.47□□□□□ -1.85
VPS50-212ENST00000476413 SYNRGQ9UMZ2 1314 aa3.46□□□□□ -1.85
VPS50-212ENST00000476413 TAAR5O14804 337 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 GMDSO60547 372 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 LCA5LO95447 670 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 CCNE2O96020 404 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 CSTAP01040 98 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 IGLV3-25P01717 112 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 STAG3L2P0CL84 134 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 C1GALT1C1LP0DN25 315 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 PAFAH1B2P68402 229 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 HNRNPA1L2Q32P51 320 aaKnown RBP3.46□□□□□ -1.86
VPS50-212ENST00000476413 KDM4DQ6B0I6 523 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 ZNF645Q8N7E2 425 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 LINC01560Q8TB33 94 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 RCN3Q96D15 328 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 OSBPL11Q9BXB4 747 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 TOLLIPQ9H0E2 274 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 KIR3DX1Q9H7L2 352 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 CES1P1Q9UKY3 287 aa3.46□□□□□ -1.86
VPS50-212ENST00000476413 ANKRD12Q6UB98 2062 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 IGLV4-60A0A075B6I1 120 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 A0A0A6YYD5 115 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 CENPXA8MT69 81 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 LINC01619G3V211 115 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 BET1O15155 118 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 CHST10O43529 356 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 TRBV12-3P01733 135 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 IGHV3-11P01762 117 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 CD74P04233 296 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 IVDP26440 423 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 RPL18AQ02543 176 aaKnown RBP3.45□□□□□ -1.86
VPS50-212ENST00000476413 PPIDQ08752 370 aaKnown RBP3.45□□□□□ -1.86
VPS50-212ENST00000476413 CDC20Q12834 499 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 ZFP1Q6P2D0 407 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 UBAC2Q8NBM4 344 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 OR1J4Q8NGS1 313 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 LILRB4Q8NHJ6 448 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 ZNF461Q8TAF7 563 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 RXFP4Q8TDU9 374 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 GHSRQ92847 366 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 L3HYPDHQ96EM0 354 aa3.45□□□□□ -1.86
VPS50-212ENST00000476413 SBNO1A3KN83 1393 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 IGKV2-28A0A075B6P5 120 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 IGHV7-4-1A0A0J9YVY3 117 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 A0A1W2PRF3 423 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 A0A1W2PRM7 423 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 OR5H1A6NKK0 313 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 ETHE1O95571 254 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 IGKV2D-28P01615 120 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 ZNF688P0C7X2 276 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 TMEM236Q5W0B7 351 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 NDUFAF7Q7L592 441 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 BHLHA15Q7RTS1 189 aaPredicted RBP3.44□□□□□ -1.86
VPS50-212ENST00000476413 NECAP1Q8NC96 275 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 OR4M1Q8NGD0 313 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 MITD1Q8WV92 249 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 RSG1Q9BU20 258 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 OR51B5Q9H339 312 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 GAL3ST2Q9H3Q3 398 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 C1orf198Q9H425 327 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 ARMC7Q9H6L4 198 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 PRO0461Q9UI25 63 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 SIGLEC9Q9Y336 463 aa3.44□□□□□ -1.86
VPS50-212ENST00000476413 MPZL1O95297 269 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 IGLV2-8P01709 118 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms