RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 PBOV1Q9GZY1 135 aa12.85□□□□□ -0.35
SNX13-207ENST00000475800 CHODLQ9H9P2 273 aa12.85□□□□□ -0.35
SNX13-207ENST00000475800 AMBNQ9NP70 447 aa12.85□□□□□ -0.35
SNX13-207ENST00000475800 IGHV1-69-2A0A0G2JMI3 117 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 C5orf63A6NC05 138 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 ANKRD30BLA7E2S9 258 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 GMDSO60547 372 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 SRSF10O75494 262 aaKnown RBP12.84□□□□□ -0.35
SNX13-207ENST00000475800 DCKP27707 260 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 CRYBB2P43320 205 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 SRP9P49458 86 aaKnown RBP12.84□□□□□ -0.35
SNX13-207ENST00000475800 TMEM33P57088 247 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 SLC3A1Q07837 685 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 MZT1Q08AG7 82 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 MED21Q13503 144 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 GALEQ14376 348 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 OR8B8Q15620 311 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 GFOD2Q3B7J2 385 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 CDONQ4KMG0 1287 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 BCL2L15Q5TBC7 163 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 LIPNQ5VXI9 398 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 CELF2-AS1Q8N7Q2 184 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 SPERTQ8NA61 448 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 HAVCR2Q8TDQ0 301 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 FBLIM1Q8WUP2 373 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 JAM3Q9BX67 310 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 REG4Q9BYZ8 158 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 ABCB9Q9NP78 766 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 FGF20Q9NP95 211 aaPredicted RBP12.84□□□□□ -0.35
SNX13-207ENST00000475800 ZNF319Q9P2F9 582 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 GNG8Q9UK08 70 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 CR1P17927 2039 aa12.84□□□□□ -0.35
SNX13-207ENST00000475800 ABCA1O95477 2261 aa12.83□□□□□ -0.35
SNX13-207ENST00000475800 IGHV4-30-2A0A087WSY4 118 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.83□□□□□ -0.36
SNX13-207ENST00000475800 IFNL4K9M1U5 179 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 FAM20BO75063 409 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 MTRF1O75570 445 aaKnown RBP12.83□□□□□ -0.36
SNX13-207ENST00000475800 GNAO1P09471 354 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 ANOS1P23352 680 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 VHLP40337 213 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 GSK3AP49840 483 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 CSNK2BP67870 215 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 MRPL28Q13084 256 aaKnown RBP12.83□□□□□ -0.36
SNX13-207ENST00000475800 OR8G1Q15617 311 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 SMN1Q16637 294 aaKnown RBP12.83□□□□□ -0.36
SNX13-207ENST00000475800 HFEQ30201 348 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 COMMD2Q86X83 199 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 ELMOD2Q8IZ81 293 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 SYS1Q8N2H4 156 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 OR52I1Q8NGK6 324 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 SIGLEC11Q96RL6 698 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 ALG8Q9BVK2 526 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 G6PC2Q9NQR9 355 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 OR52A1Q9UKL2 312 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 GTF2A1LQ9UNN4 478 aa12.83□□□□□ -0.36
SNX13-207ENST00000475800 YLPM1P49750 1951 aaKnown RBP12.83□□□□□ -0.36
SNX13-207ENST00000475800 EFCAB10A6NFE3 127 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 VWC2LB2RUY7 222 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 MAGEB4O15481 346 aaPredicted RBP12.82□□□□□ -0.36
SNX13-207ENST00000475800 RPP14O95059 124 aaKnown RBP12.82□□□□□ -0.36
SNX13-207ENST00000475800 PNPP00491 289 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 TTRP02766 147 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 PIPP12273 146 aaPredicted RBP12.82□□□□□ -0.36
SNX13-207ENST00000475800 NR4A2P43354 598 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 MAP2K3P46734 347 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 PRSS12P56730 875 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 MFGE8Q08431 387 aaPredicted RBP12.82□□□□□ -0.36
SNX13-207ENST00000475800 RIN1Q13671 783 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 TP53I3Q53FA7 332 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 C6orf52Q5T4I8 152 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 IZUMO2Q6UXV1 221 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 CCDC54Q8NEL0 328 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 OR10AD1Q8NGE0 317 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 ERGIC1Q969X5 290 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 OR2V2Q96R30 315 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 PLCXD1Q9NUJ7 323 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 ERVK13-1Q9NX77 482 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 CNOT2Q9NZN8 540 aaKnown RBP12.82□□□□□ -0.36
SNX13-207ENST00000475800 MYRFQ9Y2G1 1151 aa12.82□□□□□ -0.36
SNX13-207ENST00000475800 EXOSC1Q9Y3B2 195 aaKnown RBP12.82□□□□□ -0.36
SNX13-207ENST00000475800 SONP18583 2426 aaKnown RBP12.81□□□□□ -0.36
SNX13-207ENST00000475800 RNF223E7ERA6 249 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 MLNRO43193 412 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 CDC14BO60729 498 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 LILRA1O75019 489 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 RP2O75695 350 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 DHRS3O75911 302 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 IGLV3-1P01715 115 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 RPSAP08865 295 aaKnown RBP12.81□□□□□ -0.36
SNX13-207ENST00000475800 MYL12AP19105 171 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 CA6P23280 308 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 COL8A2P25067 703 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 GNALP38405 381 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 CD200P41217 278 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 GATA4P43694 442 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 GPR6P46095 362 aaPredicted RBP12.81□□□□□ -0.36
SNX13-207ENST00000475800 LOXL1Q08397 574 aaPredicted RBP12.81□□□□□ -0.36
SNX13-207ENST00000475800 ZBTB37Q5TC79 503 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 FDX2Q6P4F2 183 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms