RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 PRB3Q04118 309 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-207ENST00000475549 MICAQ29983 383 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 SPATS1Q496A3 300 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 TEX36Q5VZQ5 186 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 RPL13AP3Q6NVV1 102 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 BRICD5Q6PL45 260 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 CD300LDQ6UXZ3 194 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 BTN2A1Q7KYR7 527 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 SLC16A9Q7RTY1 509 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 DPY19L4Q7Z388 723 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 IQCF1Q8N6M8 205 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 OR52L1Q8NGH7 329 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 OR11L1Q8NGX0 322 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 RNF133Q8WVZ7 376 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 WDFY2Q96P53 400 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 COPS4Q9BT78 406 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 ADAT1Q9BUB4 502 aaKnown RBP5.8□□□□□ -1.48
HDAC3-207ENST00000475549 DGCR6LQ9BY27 220 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 SLC22A4Q9H015 551 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 MMADHCQ9H3L0 296 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-207ENST00000475549 MARCH7Q9H992 704 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 ZMAT3Q9HA38 289 aaKnown RBP5.8□□□□□ -1.48
HDAC3-207ENST00000475549 ARMC1Q9NVT9 282 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 C1RLQ9NZP8 487 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 PDP1Q9P0J1 537 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-207ENST00000475549 ERVK-18Q9QC07 812 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 KAAG1Q9UBP8 84 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 ARL2BPQ9Y2Y0 163 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 RHBDD3Q9Y3P4 386 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 MMP24Q9Y5R2 645 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 TANC2Q9HCD6 1990 aa5.8□□□□□ -1.48
HDAC3-207ENST00000475549 A0A0U1RQK1 487 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 hCG_38984A0A1B0GV85 526 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 B2RBV5 119 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 ACOT8O14734 319 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 CDIPTO14735 213 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 ADAM20O43506 726 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 LIPFP07098 398 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 ACKR3P25106 362 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 OPRL1P41146 370 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 CX3CR1P49238 355 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 GSK3AP49840 483 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 DLX1P56177 255 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 BPIFB3P59826 476 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 GNGT1P63211 74 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 CSNK2BP67870 215 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 TRIM25Q14258 630 aaKnown RBP5.79□□□□□ -1.48
HDAC3-207ENST00000475549 CD276Q5ZPR3 534 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 OR2T5Q6IEZ7 315 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 LCN8Q6JVE9 175 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 FIP1L1Q6UN15 594 aaKnown RBP5.79□□□□□ -1.48
HDAC3-207ENST00000475549 C16orf89Q6UX73 402 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 WDR82Q6UXN9 313 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 RHOUQ7L0Q8 258 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 PDZD9Q8IXQ8 264 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 TIGD4Q8IY51 512 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 LINC00471Q8N535 108 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 KIR3DL3Q8N743 410 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 SPERTQ8NA61 448 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 OR2T33Q8NG76 320 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 OR1M1Q8NGA1 313 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 OR5T2Q8NGG2 359 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 OR6K6Q8NGW6 343 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 OR2T29Q8NH02 315 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 REEP6Q96HR9 211 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 NSL1Q96IY1 281 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 CLPTM1LQ96KA5 538 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 LYZL4Q96KX0 146 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 TECTBQ96PL2 329 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 FEVQ99581 238 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 CCL13Q99616 98 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 ABHD6Q9BV23 337 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 SLITRK2Q9H156 845 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 TLNRD1Q9H1K6 362 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 WDR13Q9H1Z4 485 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 MAGIXQ9H6Y5 334 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 CNTD2Q9H8S5 307 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 NOX4Q9NPH5 578 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 CMC2Q9NRP2 79 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 TBC1D23Q9NUY8 699 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 TAS2R1Q9NYW7 299 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 KLHDC2Q9Y2U9 406 aa5.79□□□□□ -1.48
HDAC3-207ENST00000475549 TRAV38-1A0A0B4J264 116 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 IGHV1-69DA0A0B4J2H0 117 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 ZNF878C9JN71 531 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 P2RY10O00398 339 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 TBX1O43435 398 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 NDUFA2O43678 99 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 SELENOFO60613 162 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 IGHV1-69P01742 117 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 IGHV4-59P01825 116 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 SELLP14151 372 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 MUC1P15941 1255 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-207ENST00000475549 GSTT1P30711 240 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 SLC15A1P46059 708 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 IER3P46695 156 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 TGM4P49221 684 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 HCCSP53701 268 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 ZNF121P58317 390 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-207ENST00000475549 EIF2B1Q14232 305 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms