RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 GCGP01275 180 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 USF1P22415 310 aaPredicted RBP3.61□□□□□ -1.83
SMC5-203ENST00000475540 HRH1P35367 487 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 ARL2P36404 184 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 UGT2B10P36537 528 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 RND2P52198 227 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 VSX2P58304 361 aaPredicted RBP3.61□□□□□ -1.83
SMC5-203ENST00000475540 DSTNP60981 165 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 TSPAN5P62079 268 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 RPL31P62899 125 aaKnown RBP3.61□□□□□ -1.83
SMC5-203ENST00000475540 RPS21P63220 83 aaKnown RBP3.61□□□□□ -1.83
SMC5-203ENST00000475540 PAFAH1B2P68402 229 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 RPL18AQ02543 176 aaKnown RBP3.61□□□□□ -1.83
SMC5-203ENST00000475540 IFFO1Q0D2I5 559 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 DGCR6Q14129 220 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 KIAA0087Q14695 138 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 QPRTQ15274 297 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 CD300LGQ6UXG3 332 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 PLEKHG7Q6ZR37 379 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 H2AFVQ71UI9 128 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 OAFQ86UD1 273 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 CRLF3Q8IUI8 442 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 NELFCDQ8IXH7 590 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 FAM71AQ8IYT1 594 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 NECAP1Q8NC96 275 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 OR2L8Q8NGY9 312 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 OR2G3Q8NGZ4 309 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 FAM3DQ96BQ1 224 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 ZNF681Q96N22 645 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 SRRQ9GZT4 340 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 CHRNA10Q9GZZ6 450 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 DEFB127Q9H1M4 99 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 REEP1Q9H902 201 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 UGT1A7Q9HAW7 530 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 UGT1A8Q9HAW9 530 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 C6orf50Q9HD87 102 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 SDHAF2Q9NX18 166 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 CES1P1Q9UKY3 287 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 CFL2Q9Y281 166 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 TMEM150BA6NC51 233 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 HIDE1A8MVS5 230 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 F8VZ95 297 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 K7EN84 100 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 B4GALT5O43286 388 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 SLC16A7O60669 478 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 TCP1P17987 556 aaKnown RBP3.6□□□□□ -1.83
SMC5-203ENST00000475540 ATF6P18850 670 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 SYT1P21579 422 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 RBM34P42696 430 aaKnown RBP3.6□□□□□ -1.83
SMC5-203ENST00000475540 HCCSP53701 268 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 UBE2KP61086 200 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 TCP10Q12799 353 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 LRRC10Q5BKY1 277 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 LCN12Q6JVE5 192 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 ABHD13Q7L211 337 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 CHST4Q8NCG5 386 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 CCDC54Q8NEL0 328 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 OR10G9Q8NGN4 311 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 OR5AR1Q8NGP9 310 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 OR10Z1Q8NGY1 313 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 MCOLN3Q8TDD5 553 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 SLC38A10Q9HBR0 1119 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 CCL28Q9NRJ3 127 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 MAT2BQ9NZL9 334 aa3.6□□□□□ -1.83
SMC5-203ENST00000475540 GABRPO00591 440 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 PLPP3O14495 311 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 XKRYO14609 159 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 CDC40O60508 579 aaKnown RBP eCLIP3.59□□□□□ -1.83
SMC5-203ENST00000475540 BRI3O95415 125 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 RAB3DO95716 219 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 OR5H8P0DN80 308 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 WARSP23381 471 aaKnown RBP3.59□□□□□ -1.83
SMC5-203ENST00000475540 LOXP28300 417 aaPredicted RBP3.59□□□□□ -1.83
SMC5-203ENST00000475540 KDELR2P33947 212 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 MAGEA6P43360 314 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 OR2B8PP59922 312 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 PIGHQ14442 188 aaPredicted RBP3.59□□□□□ -1.83
SMC5-203ENST00000475540 ZSCAN26Q16670 478 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 LINC00483Q53H64 154 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 TMEM255AQ5JRV8 349 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 COA6Q5JTJ3 125 aaKnown RBP3.59□□□□□ -1.83
SMC5-203ENST00000475540 THEM4Q5T1C6 240 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 TEX43Q6ZNM6 134 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 LRRC6Q86X45 466 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 CDKL3Q8IVW4 592 aaPredicted RBP3.59□□□□□ -1.83
SMC5-203ENST00000475540 CA13Q8N1Q1 262 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 OR2Y1Q8NGV0 311 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 OR10J6PQ8NGY7 276 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 ZFP90Q8TF47 636 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 IFT81Q8WYA0 676 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 ZNF75AQ96N20 296 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 C7orf50Q9BRJ6 194 aaKnown RBP3.59□□□□□ -1.83
SMC5-203ENST00000475540 GABARAPL3Q9BY60 117 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 CLMPQ9H6B4 373 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 PLEKHA1Q9HB21 404 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 TMBIM4Q9HC24 238 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 SIRT7Q9NRC8 400 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 RHBDL2Q9NX52 303 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 ZNF226Q9NYT6 803 aa3.59□□□□□ -1.83
SMC5-203ENST00000475540 ZNF629Q9UEG4 869 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms