RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 ARPINQ7Z6K5 226 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 PPP1R14AQ96A00 147 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 FAM162AQ96A26 154 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 RCN3Q96D15 328 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 IFT27Q9BW83 186 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 TOR3AQ9H497 397 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 ADA2Q9NZK5 511 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 PLXNB1O43157 2135 aa16.76■□□□□ 0.27
VPS36-203ENST00000475375 TRBV4-1A0A0J9YWV2 114 aa16.76■□□□□ 0.27
VPS36-203ENST00000475375 ANKRD30BLA7E2S9 258 aa16.76■□□□□ 0.27
VPS36-203ENST00000475375 ANOS1P23352 680 aa16.76■□□□□ 0.27
VPS36-203ENST00000475375 SEC23BQ15437 767 aa16.76■□□□□ 0.27
VPS36-203ENST00000475375 ZBTB46Q86UZ6 589 aa16.76■□□□□ 0.27
VPS36-203ENST00000475375 OR4C13Q8NGP0 309 aa16.76■□□□□ 0.27
VPS36-203ENST00000475375 OR52J3Q8NH60 311 aa16.76■□□□□ 0.27
VPS36-203ENST00000475375 SGCDQ92629 289 aa16.76■□□□□ 0.27
VPS36-203ENST00000475375 SAR1AQ9NR31 198 aa16.76■□□□□ 0.27
VPS36-203ENST00000475375 H3BUX3 64 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 RPS27P42677 84 aaKnown RBP16.75■□□□□ 0.27
VPS36-203ENST00000475375 LOXL3P58215 753 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 GMFBP60983 142 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 TAF13Q15543 124 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 LY6EQ16553 131 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 LRRC10Q5BKY1 277 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 DRAM2Q6UX65 266 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 DPY19L4Q7Z388 723 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 Q8N7P7 452 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 SDR9C7Q8NEX9 313 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 COPS4Q9BT78 406 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 OR52D1Q9H346 318 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 RNPEPL1Q9HAU8 725 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 MRPL22Q9NWU5 206 aaKnown RBP16.75■□□□□ 0.27
VPS36-203ENST00000475375 KCNG2Q9UJ96 466 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 PRPF19Q9UMS4 504 aaKnown RBP16.75■□□□□ 0.27
VPS36-203ENST00000475375 NOTCH3Q9UM47 2321 aa16.75■□□□□ 0.27
VPS36-203ENST00000475375 ACOT8O14734 319 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 SLC2A1P11166 492 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 RHCEP18577 417 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 PRKXP51817 358 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 EFNB2P52799 333 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 C11orf88Q6PI97 169 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 SLC15A3Q8IY34 581 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 KLHDC1Q8N7A1 406 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 OR5T2Q8NGG2 359 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 OR4C15Q8NGM1 316 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 OR2T6Q8NHC8 308 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 PPP1R35Q8TAP8 253 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 SEH1LQ96EE3 360 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 CLPTM1LQ96KA5 538 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 DCTN5Q9BTE1 182 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 NDUFAF4Q9P032 175 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 CAPN7Q9Y6W3 813 aa16.74■□□□□ 0.27
VPS36-203ENST00000475375 KMT2CQ8NEZ4 4911 aaKnown RBP16.73■□□□□ 0.27
VPS36-203ENST00000475375 OR6C68A6NDL8 312 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 ARPC3O15145 178 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 DIRAS1O95057 198 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 VSIG10L2P0DP72 767 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 NCK1P16333 377 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 NAA10P41227 235 aaPredicted RBP16.73■□□□□ 0.27
VPS36-203ENST00000475375 SLC7A2P52569 658 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 CSNK2BP67870 215 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 KRT72Q14CN4 511 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 OXLD1Q5BKU9 147 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 NCR3LG1Q68D85 454 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 LYG1Q8N1E2 194 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 ITPKCQ96DU7 683 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 DMRTB1Q96MA1 342 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 SSX3Q99909 188 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 FAM234AQ9H0X4 552 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 OPA3Q9H6K4 179 aa16.73■□□□□ 0.27
VPS36-203ENST00000475375 A0A1W2PQ09 198 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 TVP23AA6NH52 213 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 NKX6-3A6NJ46 265 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 HMGB1P1B2RPK0 211 aaPredicted RBP16.72■□□□□ 0.27
VPS36-203ENST00000475375 TBX1O43435 398 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 XPNPEP2O43895 674 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 SELLP14151 372 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 PYCR1P32322 319 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 UBE2E1P51965 193 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 ACSM1Q08AH1 577 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 NSUN5P1Q3KNT7 163 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 SLC35F1Q5T1Q4 408 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 PGBD2Q6P3X8 592 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 WDR86Q86TI4 376 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 C11orf53Q8IXP5 236 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 PROKR2Q8NFJ6 384 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 OR1M1Q8NGA1 313 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 OR51G2Q8NGK0 314 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 OR9Q1Q8NGQ5 310 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 CENPMQ9NSP4 180 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 NECAP2Q9NVZ3 263 aa16.72■□□□□ 0.27
VPS36-203ENST00000475375 NME4O00746 187 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 XRCC2O43543 280 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 POU1F1P28069 291 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 OTX1P32242 354 aaPredicted RBP16.71■□□□□ 0.27
VPS36-203ENST00000475375 DDOSTP39656 456 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 KIR2DS4P43632 304 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.71■□□□□ 0.27
VPS36-203ENST00000475375 BLMHQ13867 455 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 WDR82Q6UXN9 313 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms