RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 IFITM5A6NNB3 132 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 XRCC2O43543 280 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 GUCA2AQ02747 115 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 ELFN2Q5R3F8 820 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 PXDC1Q5TGL8 231 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 CDH26Q8IXH8 852 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 UBALD2Q8IYN6 164 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 OSR2Q8N2R0 312 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 ANKRD53Q8N9V6 530 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 ACY3Q96HD9 319 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 FSCN3Q9NQT6 498 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 TNFRSF19Q9NS68 423 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 H3BMH7 237 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 CDC14BO60729 498 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 METTL15P1P0C7V9 234 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 PNLIPRP2P54317 469 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 PMP22Q01453 160 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 SPEM2Q0P670 501 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 MFSD4AQ8N468 514 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 OR10V1Q8NGI7 309 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 TEX101Q9BY14 249 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 PLA2G2FQ9BZM2 168 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 TRGV5A0A0B4J1U4 118 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 RAB19A4D1S5 217 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 LMO7DNF2Z398 122 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 JTBO76095 146 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 PSMB6P28072 239 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 DCTDP32321 178 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 ZNF239Q16600 458 aaKnown RBP9.89□□□□□ -0.83
VAPB-204ENST00000475243 NLRC3Q7RTR2 1065 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 OR2A14Q96R47 310 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 IER2Q9BTL4 223 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 SMOC1Q9H4F8 434 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 A4GNTQ9UNA3 340 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 LALBAP00709 142 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 ZNF90Q03938 601 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 Q6ZNB5 142 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 CAMKMTQ7Z624 323 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 GPR32P1Q8NGA4 272 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 OR2G2Q8NGZ5 317 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 SLC39A7Q92504 469 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 TMPRSS13Q9BYE2 586 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 KLK11Q9UBX7 282 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 ZNF727A8MUV8 499 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 PDZK1IP1Q13113 114 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 RELL2Q8NC24 303 aaPredicted RBP9.89□□□□□ -0.83
VAPB-204ENST00000475243 RHNO1Q9BSD3 238 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 AHDC1Q5TGY3 1603 aaPredicted RBP9.89□□□□□ -0.83
VAPB-204ENST00000475243 STRCQ7RTU9 1775 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 ATP6V1G2-DDX39BF2Z307 99 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 OR4E1P0C645 316 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 FGF7P21781 194 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 KIAA0141Q14154 515 aaPredicted RBP9.89□□□□□ -0.83
VAPB-204ENST00000475243 GABARAPL3Q9BY60 117 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 ACTR3CQ9C0K3 210 aaPredicted RBP9.89□□□□□ -0.83
VAPB-204ENST00000475243 CLEC1BQ9P126 229 aa9.89□□□□□ -0.83
VAPB-204ENST00000475243 STRAPQ9Y3F4 350 aaKnown RBP9.89□□□□□ -0.83
VAPB-204ENST00000475243 SERTM1A2A2V5 107 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 MGMTP16455 207 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 RPL12P30050 165 aaKnown RBP9.88□□□□□ -0.83
VAPB-204ENST00000475243 DSCR4P56555 118 aaPredicted RBP9.88□□□□□ -0.83
VAPB-204ENST00000475243 OR1C1Q15619 314 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 SLC25A35Q3KQZ1 300 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 NKX6-2Q9C056 277 aaPredicted RBP9.88□□□□□ -0.83
VAPB-204ENST00000475243 FBXL4Q9UKA2 621 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 PPP1R2P9O14990 202 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 ZXDAP98168 799 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 ACOT6Q3I5F7 207 aaPredicted RBP9.88□□□□□ -0.83
VAPB-204ENST00000475243 DHRS9Q9BPW9 319 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 NDFIP1Q9BT67 221 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 POMT2Q9UKY4 750 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 ZNFX1Q9P2E3 1918 aaKnown RBP9.88□□□□□ -0.83
VAPB-204ENST00000475243 SLC25A4P12235 298 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 OR2B8PP59922 312 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 C16orf47Q6ZP98 133 aaPredicted RBP9.88□□□□□ -0.83
VAPB-204ENST00000475243 UBE3DQ7Z6J8 389 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 OR4S1Q8NGB4 309 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 OR2V1Q8NHB1 315 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 SLC25A32Q9H2D1 315 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 SSC5DA1L4H1 1573 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 TCAPO15273 167 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 DTWD2Q8NBA8 298 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 MVB12AQ96EY5 273 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 ADGRL4Q9HBW9 690 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 RYDENQ9NUL5 291 aaKnown RBP9.88□□□□□ -0.83
VAPB-204ENST00000475243 SERGEFQ9UGK8 458 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 ZNF230Q9UIE0 474 aaPredicted RBP9.88□□□□□ -0.83
VAPB-204ENST00000475243 HDGFL3Q9Y3E1 203 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 RAB1AP62820 205 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 CDK5R1Q15078 307 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 ACOT7LQ6ZUV0 252 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 SPEM1Q8N4L4 309 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 RXFP4Q8TDU9 374 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 CORO2AQ92828 525 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 CTDSP1Q9GZU7 261 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 B9D1Q9UPM9 204 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 PDGFBP01127 241 aaPredicted RBP9.88□□□□□ -0.83
VAPB-204ENST00000475243 GPR3P46089 330 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 BTG1P62324 171 aa9.88□□□□□ -0.83
VAPB-204ENST00000475243 B4GALNT1Q00973 533 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms