RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 LIMS4P0CW20 117 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 GGT1P19440 569 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 KIR2DL3P43628 341 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 GPR1P46091 355 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 RPS6P62753 249 aaKnown RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 HGFACQ04756 655 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 DUSP2Q05923 314 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 NKG7Q16617 165 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 ENPP7Q6UWV6 458 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 DHRS13Q6UX07 377 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 ALKAL1Q6UXT8 129 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 LARP4Q71RC2 724 aaKnown RBP eCLIP3.06□□□□□ -1.92
UBR3-208ENST00000474426 TSEN54Q7Z6J9 526 aaKnown RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 TMEM173Q86WV6 379 aaPredicted RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 CHSY1Q86X52 802 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 OR6N2Q8NGY6 317 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 SYNPRQ8TBG9 265 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 ARL11Q969Q4 196 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 PYCR2Q96C36 320 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 FAIM2Q9BWQ8 316 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 OR51I1Q9H343 314 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 TBC1D17Q9HA65 648 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 GPR35Q9HC97 309 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 RETNQ9HD89 108 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 PHPT1Q9NRX4 125 aaPredicted RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 FBXO4Q9UKT5 387 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 LAMB4A4D0S4 1761 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 KDM5CP41229 1560 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 RLFQ13129 1914 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 A0A087WUU8 490 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 KIR2DS1A0A191URI9 304 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 A0A1B0GW55 424 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 H0Y8X5 98 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 K7ERI5 159 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 HSD17B6O14756 317 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 SCGNO76038 276 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 NGFRP08138 427 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 SOD3P08294 240 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 DUX4L2P0CJ85 424 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 DUX4L3P0CJ86 424 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 DUX4L5P0CJ88 424 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 DUX4L6P0CJ89 424 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 DUX4L7P0CJ90 424 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 MIPP30301 263 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 AKR1C2P52895 323 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 RAB25P57735 213 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 CLRN1P58418 232 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 DLK1P80370 383 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 MFGE8Q08431 387 aaPredicted RBP3.05□□□□□ -1.92
UBR3-208ENST00000474426 KIR2DS1Q14954 304 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 PRR31Q5SQ13 230 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 LYSMD4Q5XG99 296 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 DUX4L9Q6RFH8 374 aaPredicted RBP3.05□□□□□ -1.92
UBR3-208ENST00000474426 GSG1LQ6UXU4 331 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 PNKDQ8N490 385 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 TMEM151AQ8N4L1 468 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 C11orf44Q8N8P7 122 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 OR5AN1Q8NGI8 311 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 OR13J1Q8NGT2 312 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 TMEM174Q8WUU8 243 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 H2AFJQ9BTM1 129 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 SELENOIQ9C0D9 397 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 OR51J1Q9H342 316 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 MAP1LC3AQ9H492 121 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 ENY2Q9NPA8 101 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 SLC17A5Q9NRA2 495 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 MRPL16Q9NX20 251 aaKnown RBP3.05□□□□□ -1.92
UBR3-208ENST00000474426 JKAMPQ9P055 326 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 DUX4Q9UBX2 424 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 TRAPPC4Q9Y296 219 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 NKTRP30414 1462 aaKnown RBP3.05□□□□□ -1.92
UBR3-208ENST00000474426 COL1A2P08123 1366 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 IQGAP2Q13576 1575 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 A0A0B4J2E0 115 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 A0A1B0GX12 115 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 GAGE12BA1L429 117 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 MAP1LC3B2A6NCE7 125 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 ARL5CA6NH57 179 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 ZNF705EA8MWA4 302 aaPredicted RBP3.05□□□□□ -1.92
UBR3-208ENST00000474426 TMPRSS11DO60235 418 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 GABARAPO95166 117 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 MT-CO3P00414 261 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 ESR1P03372 595 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 CD1CP29017 333 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 GYG1P46976 350 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 CLDN20P56880 219 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 TAS2R30P59541 319 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 SRSF4Q08170 494 aaKnown RBP3.05□□□□□ -1.92
UBR3-208ENST00000474426 MEF2DQ14814 521 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 ZSWIM7Q19AV6 140 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 SLC25A52Q3SY17 297 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 WDR74Q6RFH5 385 aaPredicted RBP3.05□□□□□ -1.92
UBR3-208ENST00000474426 DET1Q7L5Y6 550 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 SERPINA11Q86U17 422 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 KLHDC8BQ8IXV7 354 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 STPG4Q8N801 248 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 OR9I1Q8NGQ6 314 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 OR2T27Q8NH04 317 aa3.05□□□□□ -1.92
UBR3-208ENST00000474426 OR4L1Q8NH43 312 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms