RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ADRA2CP18825 462 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 EPHA1P21709 976 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 GSK3AP49840 483 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 HCCSP53701 268 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 EFNB1P98172 346 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 KDM4DQ6B0I6 523 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 LRRN1Q6UXK5 716 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 KRT77Q7Z794 578 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 AMIGO2Q86SJ2 522 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 DEFB108BQ8NET1 73 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 ZNF418Q8TF45 676 aaPredicted RBP9.36□□□□□ -0.91
CKS1B-206ENST00000474215 NEIL1Q96FI4 390 aaPredicted RBP9.36□□□□□ -0.91
CKS1B-206ENST00000474215 SSBP3Q9BWW4 388 aaPredicted RBP9.36□□□□□ -0.91
CKS1B-206ENST00000474215 PRRG3Q9BZD7 231 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 RGCCQ9H4X1 137 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 NIPAL2Q9H841 368 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 OR5V1Q9UGF6 321 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 LAMP5Q9UJQ1 280 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 INSIG2Q9Y5U4 225 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 AUP1Q9Y679 476 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
CKS1B-206ENST00000474215 hCG_38984A0A1B0GV85 526 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 ZAR1LA6NP61 321 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 PRKYO43930 277 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 FSHBP01225 129 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 ZNF12P17014 697 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 EPHA2P29317 976 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 GNB2P62879 340 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 ZNF154Q13106 437 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 SNCBQ16143 134 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 GFOD2Q3B7J2 385 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 SLX4IPQ5VYV7 408 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 KCTD18Q6PI47 426 aaPredicted RBP9.35□□□□□ -0.91
CKS1B-206ENST00000474215 DEGS2Q6QHC5 323 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 LYPD2Q6UXB3 125 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 DCDC5Q6ZRR9 648 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 ASRGL1Q7L266 308 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 NLRC3Q7RTR2 1065 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 C19orf18Q8NEA5 215 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 CSNK2A3Q8NEV1 391 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 OR8B3Q8NGG8 313 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 OR8S1Q8NH09 359 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 LRTOMTQ8WZ04 291 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 DVL3Q92997 716 aaPredicted RBP9.35□□□□□ -0.91
CKS1B-206ENST00000474215 CENPNQ96H22 339 aaPredicted RBP9.35□□□□□ -0.91
CKS1B-206ENST00000474215 OR8B2Q96RD0 313 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 MRI1Q9BV20 369 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 GABARAPL1Q9H0R8 117 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 C1orf123Q9NWV4 160 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 H2AFY2Q9P0M6 372 aaPredicted RBP9.35□□□□□ -0.91
CKS1B-206ENST00000474215 ENOPH1Q9UHY7 261 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 RHBDD3Q9Y3P4 386 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 LRP12Q9Y561 859 aa9.35□□□□□ -0.91
CKS1B-206ENST00000474215 CCDC182A6NF36 153 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 ACOD1A6NK06 481 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 A6NLC8 198 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 LGALS8O00214 317 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 VENTXO95231 258 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 MRPL3P09001 348 aaKnown RBP9.34□□□□□ -0.91
CKS1B-206ENST00000474215 FPR2P25090 351 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 CD80P33681 288 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 GNALP38405 381 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 PSMB10P40306 273 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 PITPNBP48739 271 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 PSMA6P60900 246 aaKnown RBP9.34□□□□□ -0.91
CKS1B-206ENST00000474215 PAX2Q02962 417 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 ROM1Q03395 351 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 PAX8Q06710 450 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 OR8B8Q15620 311 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 KCNJ8Q15842 424 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 LCN1P1Q5VSP4 162 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 C12orf73Q69YU5 71 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 ZNF826PQ6ZT77 177 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 USP43Q70EL4 1123 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 MEPCEQ7L2J0 689 aaKnown RBP9.34□□□□□ -0.91
CKS1B-206ENST00000474215 FTMTQ8N4E7 242 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 TCEANCQ8N8B7 351 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 BOLLQ8N9W6 283 aaKnown RBP9.34□□□□□ -0.91
CKS1B-206ENST00000474215 TMEM163Q8TC26 289 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 RAB40AQ8WXH6 277 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 ASB17Q8WXJ9 295 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 MROQ9BYG7 248 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 TRIM36Q9NQ86 728 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 CLN8Q9UBY8 286 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 ZNF391Q9UJN7 358 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 TMEM14AQ9Y6G1 99 aa9.34□□□□□ -0.91
CKS1B-206ENST00000474215 TRAV38-1A0A0B4J264 116 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 KIR2DS1A0A191URI9 304 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 TMEM269A0A1B0GVZ9 245 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 C3orf80F5H4A9 247 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 M0R129 80 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 TNFRSF13BO14836 293 aaPredicted RBP9.33□□□□□ -0.92
CKS1B-206ENST00000474215 NDUFA2O43678 99 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 ZNF254O75437 659 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 RGS9O75916 674 aaPredicted RBP9.33□□□□□ -0.92
CKS1B-206ENST00000474215 CST4P01036 141 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 LHBP01229 141 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 DCTDP32321 178 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 HOXA4Q00056 320 aaPredicted RBP9.33□□□□□ -0.92
CKS1B-206ENST00000474215 IL5RAQ01344 420 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms