RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 ACOD1A6NK06 481 aa17.18■□□□□ 0.34
SNX13-206ENST00000474067 A6NLC8 198 aa17.18■□□□□ 0.34
SNX13-206ENST00000474067 PPIAL4GP0DN37 164 aa17.18■□□□□ 0.34
SNX13-206ENST00000474067 ZNF12P17014 697 aa17.18■□□□□ 0.34
SNX13-206ENST00000474067 ADRA2CP18825 462 aa17.18■□□□□ 0.34
SNX13-206ENST00000474067 ZNF154Q13106 437 aa17.18■□□□□ 0.34
SNX13-206ENST00000474067 CD276Q5ZPR3 534 aa17.18■□□□□ 0.34
SNX13-206ENST00000474067 HS3ST5Q8IZT8 346 aa17.18■□□□□ 0.34
SNX13-206ENST00000474067 UTP4Q969X6 686 aaKnown RBP17.18■□□□□ 0.34
SNX13-206ENST00000474067 TMEM246Q9BRR3 403 aa17.18■□□□□ 0.34
SNX13-206ENST00000474067 INSIG2Q9Y5U4 225 aa17.18■□□□□ 0.34
SNX13-206ENST00000474067 MPC1Q9Y5U8 109 aa17.18■□□□□ 0.34
SNX13-206ENST00000474067 ANK3Q12955 4377 aaKnown RBP17.17■□□□□ 0.34
SNX13-206ENST00000474067 SLC22A31A6NKX4 558 aa17.17■□□□□ 0.34
SNX13-206ENST00000474067 FAM20BO75063 409 aa17.17■□□□□ 0.34
SNX13-206ENST00000474067 ZNF254O75437 659 aa17.17■□□□□ 0.34
SNX13-206ENST00000474067 NAA10P41227 235 aaPredicted RBP17.17■□□□□ 0.34
SNX13-206ENST00000474067 PITPNBP48739 271 aa17.17■□□□□ 0.34
SNX13-206ENST00000474067 PSMA6P60900 246 aaKnown RBP17.17■□□□□ 0.34
SNX13-206ENST00000474067 ATRQ13535 2644 aa17.17■□□□□ 0.34
SNX13-206ENST00000474067 PTGES3Q15185 160 aaKnown RBP17.17■□□□□ 0.34
SNX13-206ENST00000474067 C11orf91Q3C1V1 193 aa17.17■□□□□ 0.34
SNX13-206ENST00000474067 DUS3LQ96G46 650 aaKnown RBP17.17■□□□□ 0.34
SNX13-206ENST00000474067 MICU1Q9BPX6 476 aa17.17■□□□□ 0.34
SNX13-206ENST00000474067 RNPEPL1Q9HAU8 725 aa17.17■□□□□ 0.34
SNX13-206ENST00000474067 UFSP2Q9NUQ7 469 aa17.17■□□□□ 0.34
SNX13-206ENST00000474067 DNAJC27Q9NZQ0 273 aa17.17■□□□□ 0.34
SNX13-206ENST00000474067 ERVK-18Q9QC07 812 aa17.17■□□□□ 0.34
SNX13-206ENST00000474067 hCG_1807616A0A1W2PRN6 198 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 LGALS8O00214 317 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 PSKH1P11801 424 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 DCTDP32321 178 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 HILS1P60008 231 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 FAM3AP98173 230 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 APOFQ13790 326 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 OR8B8Q15620 311 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 PRAMEF6Q5VXH4 476 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 GID4Q8IVV7 300 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 HIST1H2AAQ96QV6 131 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 TEAD3Q99594 435 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 RTL8AQ9BWD3 113 aa17.16■□□□□ 0.34
SNX13-206ENST00000474067 PAPOLGQ9BWT3 736 aaKnown RBP17.16■□□□□ 0.34
SNX13-206ENST00000474067 hCG_38984A0A1B0GV85 526 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 SELENOFO60613 162 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 LIPFP07098 398 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 GRPP07492 148 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 ATP6V1B1P15313 513 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 ALOX5APP20292 161 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 ZFP36P26651 326 aaKnown RBP17.15■□□□□ 0.34
SNX13-206ENST00000474067 GFOD2Q3B7J2 385 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 ZNF829Q3KNS6 432 aaPredicted RBP17.15■□□□□ 0.34
SNX13-206ENST00000474067 FAM81AQ8TBF8 368 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 RAB40AQ8WXH6 277 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 SGK3Q96BR1 496 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 CNN2Q99439 309 aaKnown RBP17.15■□□□□ 0.34
SNX13-206ENST00000474067 GABARAPL1Q9H0R8 117 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 ZMAT3Q9HA38 289 aaKnown RBP17.15■□□□□ 0.34
SNX13-206ENST00000474067 BRD7Q9NPI1 651 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 C1orf123Q9NWV4 160 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 NUP50Q9UKX7 468 aa17.15■□□□□ 0.34
SNX13-206ENST00000474067 IGHV3-64DA0A0J9YX35 117 aa17.14■□□□□ 0.33
SNX13-206ENST00000474067 OOEPA6NGQ2 149 aa17.14■□□□□ 0.33
SNX13-206ENST00000474067 TMEM210A6NLX4 147 aa17.14■□□□□ 0.33
SNX13-206ENST00000474067 SLC2A5P22732 501 aa17.14■□□□□ 0.33
SNX13-206ENST00000474067 GSK3AP49840 483 aa17.14■□□□□ 0.33
SNX13-206ENST00000474067 DAPP51397 102 aa17.14■□□□□ 0.33
SNX13-206ENST00000474067 PRSS12P56730 875 aa17.14■□□□□ 0.33
SNX13-206ENST00000474067 NXNL2Q5VZ03 156 aa17.14■□□□□ 0.33
SNX13-206ENST00000474067 TMEM236Q5W0B7 351 aa17.14■□□□□ 0.33
SNX13-206ENST00000474067 DEFB108BQ8NET1 73 aa17.14■□□□□ 0.33
SNX13-206ENST00000474067 MOB1AQ9H8S9 216 aa17.14■□□□□ 0.33
SNX13-206ENST00000474067 IGHV2-70DA0A0C4DH43 119 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 ENSAO43768 121 aaKnown RBP17.13■□□□□ 0.33
SNX13-206ENST00000474067 MTRF1O75570 445 aaKnown RBP17.13■□□□□ 0.33
SNX13-206ENST00000474067 AVPP01185 164 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 MUC1P15941 1255 aaPredicted RBP17.13■□□□□ 0.33
SNX13-206ENST00000474067 MAP2K3P46734 347 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 RIDAP52758 137 aaKnown RBP17.13■□□□□ 0.33
SNX13-206ENST00000474067 BPIFB3P59826 476 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 POU4F2Q12837 409 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 MPPED2Q15777 294 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 SLX4IPQ5VYV7 408 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 KDM4DQ6B0I6 523 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 C1orf229Q6ZS94 237 aaPredicted RBP17.13■□□□□ 0.33
SNX13-206ENST00000474067 PRSS45Q7RTY3 260 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 ZNF679Q8IYX0 411 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 CENPNQ96H22 339 aaPredicted RBP17.13■□□□□ 0.33
SNX13-206ENST00000474067 TECTBQ96PL2 329 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 LRP12Q9Y561 859 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 ORC6Q9Y5N6 252 aa17.13■□□□□ 0.33
SNX13-206ENST00000474067 A0A0U1RQV5 110 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 TRAPPC2LH3BP13 241 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 ZNF205O95201 554 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 PSMB10P40306 273 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 PMELP40967 661 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 MTNR1AP48039 350 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 SEC61A1P61619 476 aaKnown RBP17.12■□□□□ 0.33
SNX13-206ENST00000474067 MICBQ29980 383 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 CCDC121Q6ZUS5 278 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 MEPCEQ7L2J0 689 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms